RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 CCDC38Q502W7 563 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 FAM83BQ5T0W9 1011 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 KLHL24Q6TFL4 600 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 TUBA1AQ71U36 451 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 DCUN1D3Q8IWE4 304 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 ARRDC2Q8TBH0 407 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 TMEM255BQ8WV15 326 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 GOLGA1Q92805 767 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 WBP1Q96G27 269 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 SLC39A13Q96H72 371 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 LRFN5Q96NI6 719 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 YME1L1Q96TA2 773 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 TUBA1CQ9BQE3 449 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 NPLQ9BXD5 320 aaPredicted RBP3.16□□□□□ -1.9
CPSF3-205ENST00000489629 EVA1AQ9H8M9 152 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 CHODLQ9H9P2 273 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 EBF2Q9HAK2 575 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 CNPY2Q9Y2B0 182 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.15□□□□□ -1.91
CPSF3-205ENST00000489629 EBAG9O00559 213 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 WNT9BO14905 357 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 CLGNO14967 610 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 HSPA12AO43301 675 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 XPNPEP2O43895 674 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 LMX1BO60663 402 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 DHRS4L1P0CG22 281 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 TNNT1P13805 278 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 DGKAP23743 735 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 ECT2LQ008S8 904 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 CHAF1AQ13111 956 aaPredicted RBP3.15□□□□□ -1.91
CPSF3-205ENST00000489629 SLC18A3Q16572 532 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 CALCRLQ16602 461 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 TIGD6Q17RP2 521 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 KIF26BQ2KJY2 2108 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 UNQ6126/PRO20091Q6UXV3 157 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 SFTPA2Q8IWL1 248 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 CCDC105Q8IYK2 499 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 LMNTD1Q8N9Z9 388 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 POF1BQ8WVV4 589 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 THAP4Q8WY91 577 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 PGLYRP2Q96PD5 576 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 TTC12Q9H892 705 aaPredicted RBP3.15□□□□□ -1.91
CPSF3-205ENST00000489629 PLCB1Q9NQ66 1216 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 SPATS2LQ9NUQ6 558 aaKnown RBP3.15□□□□□ -1.91
CPSF3-205ENST00000489629 SMARCAL1Q9NZC9 954 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 ADGRF5Q8IZF2 1346 aa3.15□□□□□ -1.91
CPSF3-205ENST00000489629 IGHV4OR15-8A0A075B7B6 117 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 F5H423 210 aaPredicted RBP3.14□□□□□ -1.91
CPSF3-205ENST00000489629 CLDN14O95500 239 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 PAK4O96013 591 aaPredicted RBP3.14□□□□□ -1.91
CPSF3-205ENST00000489629 TK1P04183 234 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 LINC00271P0C7V0 271 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 RYKP34925 604 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 ADD2P35612 726 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 LIFRP42702 1097 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 KRTAP10-12P60413 245 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 TUBB8Q3ZCM7 444 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 STPG1Q5TH74 334 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 DENND1BQ6P3S1 775 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 C1orf228Q6PIY5 440 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 FOXL2NBQ6ZUU3 175 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 MYLK4Q86YV6 388 aaPredicted RBP3.14□□□□□ -1.91
CPSF3-205ENST00000489629 GHDCQ8N2G8 530 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 ZNF441Q8N8Z8 693 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 NEK9Q8TD19 979 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 SECTM1Q8WVN6 248 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 HSPH1Q92598 858 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 CD101Q93033 1021 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 RBM17Q96I25 401 aaKnown RBP3.14□□□□□ -1.91
CPSF3-205ENST00000489629 CLSTN3Q9BQT9 956 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 MMTAG2Q9BU76 263 aaKnown RBP3.14□□□□□ -1.91
CPSF3-205ENST00000489629 MMP28Q9H239 520 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 SAYSD1Q9NPB0 183 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 ENTPD7Q9NQZ7 604 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 SLC9A2Q9UBY0 812 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 NDRG3Q9UGV2 375 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 SLCO3A1Q9UIG8 710 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 DERAQ9Y315 318 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 PAM16Q9Y3D7 125 aa3.14□□□□□ -1.91
CPSF3-205ENST00000489629 CBY3A6NI87 242 aa3.13□□□□□ -1.91
CPSF3-205ENST00000489629 HNRNPCL2B2RXH8 293 aa3.13□□□□□ -1.91
CPSF3-205ENST00000489629 STX16-NPEPL1H3BU86 382 aa3.13□□□□□ -1.91
CPSF3-205ENST00000489629 STX16O14662 325 aa3.13□□□□□ -1.91
CPSF3-205ENST00000489629 PLIN1O60240 522 aa3.13□□□□□ -1.91
CPSF3-205ENST00000489629 KDM4BO94953 1096 aa3.13□□□□□ -1.91
CPSF3-205ENST00000489629 HMGB1P09429 215 aaKnown RBP3.13□□□□□ -1.91
CPSF3-205ENST00000489629 SRD5A1P18405 259 aa3.13□□□□□ -1.91
CPSF3-205ENST00000489629 ITGAXP20702 1163 aa3.13□□□□□ -1.91
CPSF3-205ENST00000489629 ANOS1P23352 680 aa3.13□□□□□ -1.91
CPSF3-205ENST00000489629 AARSP49588 968 aaKnown RBP eCLIP3.13□□□□□ -1.91
CPSF3-205ENST00000489629 TROAPQ12815 778 aa3.13□□□□□ -1.91
CPSF3-205ENST00000489629 ZNF155Q12901 538 aaPredicted RBP3.13□□□□□ -1.91
CPSF3-205ENST00000489629 RBBP5Q15291 538 aaKnown RBP3.13□□□□□ -1.91
CPSF3-205ENST00000489629 MARK2Q7KZI7 788 aaKnown RBP3.13□□□□□ -1.91
CPSF3-205ENST00000489629 SHFQ7M4L6 423 aa3.13□□□□□ -1.91
CPSF3-205ENST00000489629 PRSS45Q7RTY3 260 aa3.13□□□□□ -1.91
CPSF3-205ENST00000489629 SATL1Q86VE3 508 aa3.13□□□□□ -1.91
CPSF3-205ENST00000489629 SPATA22Q8NHS9 363 aa3.13□□□□□ -1.91
CPSF3-205ENST00000489629 SNAPC3Q92966 411 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms