RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 KIAA1549LQ6ZVL6 1849 aa21.09■□□□□ 0.97
SND1-214ENST00000489417 NDST3O95803 873 aa21.09■□□□□ 0.97
SND1-214ENST00000489417 FGF1P05230 155 aa21.09■□□□□ 0.97
SND1-214ENST00000489417 CA4P22748 312 aa21.09■□□□□ 0.97
SND1-214ENST00000489417 NNMTP40261 264 aa21.09■□□□□ 0.97
SND1-214ENST00000489417 SNRPD1P62314 119 aaKnown RBP21.09■□□□□ 0.97
SND1-214ENST00000489417 ZNF844Q08AG5 666 aa21.09■□□□□ 0.97
SND1-214ENST00000489417 MESP2Q0VG99 397 aa21.09■□□□□ 0.97
SND1-214ENST00000489417 EIF4HQ15056 248 aaKnown RBP21.09■□□□□ 0.97
SND1-214ENST00000489417 AAK1Q2M2I8 961 aa21.09■□□□□ 0.97
SND1-214ENST00000489417 ACCSLQ4AC99 568 aa21.09■□□□□ 0.97
SND1-214ENST00000489417 SIRPB2Q5JXA9 342 aa21.09■□□□□ 0.97
SND1-214ENST00000489417 UNC5AQ6ZN44 842 aa21.09■□□□□ 0.97
SND1-214ENST00000489417 PLCD3Q8N3E9 789 aa21.09■□□□□ 0.97
SND1-214ENST00000489417 TERB1Q8NA31 727 aa21.09■□□□□ 0.97
SND1-214ENST00000489417 CSGALNACT1Q8TDX6 532 aa21.09■□□□□ 0.97
SND1-214ENST00000489417 NXPE3Q969Y0 559 aa21.09■□□□□ 0.97
SND1-214ENST00000489417 EVLQ9UI08 416 aaPredicted RBP21.09■□□□□ 0.97
SND1-214ENST00000489417 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.08■□□□□ 0.97
SND1-214ENST00000489417 PRRT4C9JH25 899 aa21.08■□□□□ 0.97
SND1-214ENST00000489417 TIMM44O43615 452 aa21.08■□□□□ 0.97
SND1-214ENST00000489417 TRAF2Q12933 501 aa21.08■□□□□ 0.97
SND1-214ENST00000489417 STAT4Q14765 748 aa21.08■□□□□ 0.97
SND1-214ENST00000489417 CARD16Q5EG05 197 aa21.08■□□□□ 0.97
SND1-214ENST00000489417 CEP85LQ5SZL2 805 aa21.08■□□□□ 0.97
SND1-214ENST00000489417 STEAP4Q687X5 459 aa21.08■□□□□ 0.97
SND1-214ENST00000489417 NAIF1Q69YI7 327 aaPredicted RBP21.08■□□□□ 0.97
SND1-214ENST00000489417 RYBPQ8N488 228 aaPredicted RBP21.08■□□□□ 0.97
SND1-214ENST00000489417 CHFRQ96EP1 664 aa21.08■□□□□ 0.97
SND1-214ENST00000489417 CCDC77Q9BR77 488 aa21.08■□□□□ 0.97
SND1-214ENST00000489417 TRIM56Q9BRZ2 755 aaKnown RBP21.08■□□□□ 0.97
SND1-214ENST00000489417 PLAC1Q9HBJ0 212 aa21.08■□□□□ 0.97
SND1-214ENST00000489417 SLC8A2Q9UPR5 921 aa21.08■□□□□ 0.97
SND1-214ENST00000489417 CHKBQ9Y259 395 aa21.08■□□□□ 0.97
SND1-214ENST00000489417 PCDHGC4Q9Y5F7 938 aa21.08■□□□□ 0.97
SND1-214ENST00000489417 MAGEB16A2A368 324 aa21.07■□□□□ 0.96
SND1-214ENST00000489417 GALNT3Q14435 633 aa21.07■□□□□ 0.96
SND1-214ENST00000489417 PTPRNQ16849 979 aa21.07■□□□□ 0.96
SND1-214ENST00000489417 LEXMQ3ZCV2 418 aa21.07■□□□□ 0.96
SND1-214ENST00000489417 PREPLQ4J6C6 727 aaPredicted RBP21.07■□□□□ 0.96
SND1-214ENST00000489417 PCID2Q5JVF3 399 aa21.07■□□□□ 0.96
SND1-214ENST00000489417 PPHLN1Q8NEY8 458 aaKnown RBP21.07■□□□□ 0.96
SND1-214ENST00000489417 OR6K2Q8NGY2 324 aa21.07■□□□□ 0.96
SND1-214ENST00000489417 GSDMBQ8TAX9 411 aa21.07■□□□□ 0.96
SND1-214ENST00000489417 FBF1Q8TES7 1133 aa21.07■□□□□ 0.96
SND1-214ENST00000489417 TMEM109Q9BVC6 243 aa21.07■□□□□ 0.96
SND1-214ENST00000489417 SOX13Q9UN79 622 aa21.07■□□□□ 0.96
SND1-214ENST00000489417 FAM237BA0A1B0GVD1 139 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 OPA1O60313 960 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 STX2P32856 288 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 ST8SIA6P61647 398 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 GPS2Q13227 327 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 POU6F1Q14863 301 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 SMAD2Q15796 467 aaKnown RBP21.06■□□□□ 0.96
SND1-214ENST00000489417 MYLK3Q32MK0 819 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 HABP4Q5JVS0 413 aaKnown RBP21.06■□□□□ 0.96
SND1-214ENST00000489417 SPANXN3Q5MJ09 141 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 ARMC3Q5W041 872 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 Q6ZVU0 165 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 PLPP6Q8IY26 295 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 FRS2Q8WU20 508 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 MYO19Q96H55 970 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 KIFC1Q9BW19 673 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 ACSS3Q9H6R3 686 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 HECAQ9UBI9 543 aaPredicted RBP21.06■□□□□ 0.96
SND1-214ENST00000489417 LIMD1Q9UGP4 676 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 RABGEF1Q9UJ41 708 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 PLA2G4CQ9UP65 541 aa21.06■□□□□ 0.96
SND1-214ENST00000489417 TCRBV9S1A1TA0A576 114 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 TBC1D3BA6NDS4 549 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 TTC34A8MYJ7 566 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 BNIP3LO60238 219 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 KAT7O95251 611 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 PRLP01236 227 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 POLBP06746 335 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 IVLP07476 585 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 ALADP13716 330 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 ADRA1DP25100 572 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 RECQLP46063 649 aaPredicted RBP21.05■□□□□ 0.96
SND1-214ENST00000489417 CCNHP51946 323 aaPredicted RBP21.05■□□□□ 0.96
SND1-214ENST00000489417 BCL2L1Q07817 233 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 MSLNQ13421 630 aaPredicted RBP21.05■□□□□ 0.96
SND1-214ENST00000489417 CRYMQ14894 314 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 KRT71Q3SY84 523 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 MTERF4Q7Z6M4 381 aaKnown RBP21.05■□□□□ 0.96
SND1-214ENST00000489417 CROCCP2Q86T23 111 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 KDM1BQ8NB78 822 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 LPCAT1Q8NF37 534 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 PTCD2Q8WV60 388 aaKnown RBP21.05■□□□□ 0.96
SND1-214ENST00000489417 ZNF669Q96BR6 464 aaPredicted RBP21.05■□□□□ 0.96
SND1-214ENST00000489417 TUBGCP5Q96RT8 1024 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 RANBP9Q96S59 729 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 SH3GL2Q99962 352 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 ADGRE3Q9BY15 652 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 ROPN1BQ9BZX4 212 aaPredicted RBP21.05■□□□□ 0.96
SND1-214ENST00000489417 ATP13A3Q9H7F0 1226 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 ROPN1Q9HAT0 212 aaPredicted RBP21.05■□□□□ 0.96
SND1-214ENST00000489417 KCNK12Q9HB15 430 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 MRM3Q9HC36 420 aaKnown RBP21.05■□□□□ 0.96
SND1-214ENST00000489417 TCAF1Q9Y4C2 921 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms