RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 TM7SF2O76062 418 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 ITIH2P19823 946 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 ALG11Q2TAA5 492 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 LRRC73Q5JTD7 316 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 BRMS1LQ5PSV4 323 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 BORAQ6PGQ7 559 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 OLFML1Q6UWY5 402 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 TTC7BQ86TV6 843 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 PASD1Q8IV76 773 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 TP53I13Q8NBR0 393 aaPredicted RBP16.4■□□□□ 0.22
USP48-210ENST00000489108 OR6C4Q8NGE1 309 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 VOPP1Q96AW1 172 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 TMEM159Q96B96 161 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 C1orf74Q96LT6 269 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 KLHL32Q96NJ5 620 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 NPY6RQ99463 290 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 CMKLR1Q99788 373 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 EPAS1Q99814 870 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 INTS2Q9H0H0 1204 aaKnown RBP16.4■□□□□ 0.22
USP48-210ENST00000489108 RNF215Q9Y6U7 377 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 USP9YO00507 2555 aaPredicted RBP16.39■□□□□ 0.22
USP48-210ENST00000489108 UTP20O75691 2785 aaKnown RBP16.39■□□□□ 0.21
USP48-210ENST00000489108 CHD5Q8TDI0 1954 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 IGLV3-10A0A075B6K4 115 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 KRIT1O00522 736 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 TOR1BO14657 336 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 ERBB2P04626 1255 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 UGT2B4P06133 528 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 KRT85P78386 507 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 SLC6A3Q01959 620 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 KCNAB2Q13303 367 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 SERINC3Q13530 473 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 KLHL40Q2TBA0 621 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 ENPP7Q6UWV6 458 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 ZNF783Q6ZMS7 281 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 TMPRSS9Q7Z410 1059 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 GKN2Q86XP6 184 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 PLPP6Q8IY26 295 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 GPR156Q8NFN8 814 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 ARHGEF26Q96DR7 871 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 CEP63Q96MT8 703 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 PSMG3-AS1Q96PY0 264 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 ZNF212Q9UDV6 495 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 APPL1Q9UKG1 709 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 USP9XQ93008 2570 aaPredicted RBP16.39■□□□□ 0.21
USP48-210ENST00000489108 LRRK1Q38SD2 2015 aa16.39■□□□□ 0.21
USP48-210ENST00000489108 SDK2Q58EX2 2172 aa16.38■□□□□ 0.21
USP48-210ENST00000489108 RASGRP1O95267 797 aa16.38■□□□□ 0.21
USP48-210ENST00000489108 HSP90AA1P07900 732 aaKnown RBP16.38■□□□□ 0.21
USP48-210ENST00000489108 CASRP41180 1078 aa16.38■□□□□ 0.21
USP48-210ENST00000489108 PEX5P50542 639 aa16.38■□□□□ 0.21
USP48-210ENST00000489108 POLE2P56282 527 aa16.38■□□□□ 0.21
USP48-210ENST00000489108 RNASE9P60153 205 aaKnown RBP16.38■□□□□ 0.21
USP48-210ENST00000489108 GNA12Q03113 381 aa16.38■□□□□ 0.21
USP48-210ENST00000489108 IRF4Q15306 451 aa16.38■□□□□ 0.21
USP48-210ENST00000489108 PHF19Q5T6S3 580 aa16.38■□□□□ 0.21
USP48-210ENST00000489108 SLC26A9Q7LBE3 791 aa16.38■□□□□ 0.21
USP48-210ENST00000489108 CXorf40AQ8TE69 158 aa16.38■□□□□ 0.21
USP48-210ENST00000489108 ISG20Q96AZ6 181 aaKnown RBP16.38■□□□□ 0.21
USP48-210ENST00000489108 GSDMAQ96QA5 445 aa16.38■□□□□ 0.21
USP48-210ENST00000489108 C1QTNF7Q9BXJ2 289 aa16.38■□□□□ 0.21
USP48-210ENST00000489108 SEMA6CQ9H3T2 930 aa16.38■□□□□ 0.21
USP48-210ENST00000489108 SPTAN1Q13813 2472 aaKnown RBP16.38■□□□□ 0.21
USP48-210ENST00000489108 TMEM110-MUSTN1A8MSY1 372 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 BECN2A8MW95 431 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.37■□□□□ 0.21
USP48-210ENST00000489108 POP4O95707 220 aaKnown RBP16.37■□□□□ 0.21
USP48-210ENST00000489108 GLB1P16278 677 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 CD82P27701 267 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 ACVRL1P37023 503 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 USP8P40818 1118 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 SULT1E1P49888 294 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 SRP54P61011 504 aaKnown RBP16.37■□□□□ 0.21
USP48-210ENST00000489108 DEUP1Q05D60 604 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 C16orf72Q14CZ0 275 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 NCAPHQ15003 741 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 MYLK3Q32MK0 819 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 GJB7Q6PEY0 223 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 SLITRK4Q8IW52 837 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 SFTPA2Q8IWL1 248 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 DRC7Q8IY82 874 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 FAM26EQ8N5C1 309 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 ZNF397Q8NF99 534 aaPredicted RBP16.37■□□□□ 0.21
USP48-210ENST00000489108 NKD1Q969G9 470 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 SNX21Q969T3 373 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 WRAP53Q9BUR4 548 aaKnown RBP16.37■□□□□ 0.21
USP48-210ENST00000489108 RRN3Q9NYV6 651 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.37■□□□□ 0.21
USP48-210ENST00000489108 COQ6Q9Y2Z9 468 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 LRP4O75096 1905 aa16.37■□□□□ 0.21
USP48-210ENST00000489108 BLACEA4D250 179 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 CCL4P13236 92 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 SNRPD1P62314 119 aaKnown RBP16.36■□□□□ 0.21
USP48-210ENST00000489108 LRRC14Q15048 493 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 WSCD2Q2TBF2 565 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 CERCAMQ5T4B2 595 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 TMEM164Q5U3C3 297 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 KCTD16Q68DU8 428 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 HIST2H2BCQ6DN03 193 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 ISM2Q6H9L7 571 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms