RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 SCAPQ12770 1279 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 PPIL2Q13356 520 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 VGLL4Q14135 290 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 POTEHQ6S545 545 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 LINC00523Q86TU6 105 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 SULF1Q8IWU6 871 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 SPPL2BQ8TCT7 592 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 SNRNP27Q8WVK2 155 aaKnown RBP19.69■□□□□ 0.74
HMG20B-213ENST00000488973 NXNL1Q96CM4 212 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 ZNF512Q96ME7 567 aaPredicted RBP19.69■□□□□ 0.74
HMG20B-213ENST00000488973 SLC29A1Q99808 456 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 SYT17Q9BSW7 474 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 SPAG4Q9NPE6 437 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 PFDN4Q9NQP4 134 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 PDGFCQ9NRA1 345 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 GDAP2Q9NXN4 497 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 CD300AQ9UGN4 299 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 SLC8A2Q9UPR5 921 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 SNX13Q9Y5W8 968 aa19.69■□□□□ 0.74
HMG20B-213ENST00000488973 PIRO00625 290 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 PSMD3O43242 534 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 CNMDO75829 334 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 PGK1P00558 417 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 STMN1P16949 149 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 ACADVLP49748 655 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 GALNT2Q10471 571 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 PRPSAP1Q14558 356 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 MTX3Q5HYI7 312 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 REP15Q6BDI9 236 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 SAPCD2Q86UD0 394 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 CROCCP3Q8IVE0 287 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 MYO1HQ8N1T3 1032 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 NPWQ8N729 165 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 HMGCLL1Q8TB92 370 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 PBXIP1Q96AQ6 731 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 TNIP3Q96KP6 325 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 TEKT5Q96M29 485 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 MRPL57Q9BQC6 102 aaKnown RBP19.68■□□□□ 0.74
HMG20B-213ENST00000488973 CLK4Q9HAZ1 481 aaKnown RBP19.68■□□□□ 0.74
HMG20B-213ENST00000488973 MRM3Q9HC36 420 aaKnown RBP19.68■□□□□ 0.74
HMG20B-213ENST00000488973 FAIMQ9NVQ4 179 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 FBP2O00757 339 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 HTRA2O43464 458 aaPredicted RBP19.68■□□□□ 0.74
HMG20B-213ENST00000488973 ARHGAP1Q07960 439 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 KCTD13Q8WZ19 329 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 HNRNPABQ99729 332 aaKnown RBP19.68■□□□□ 0.74
HMG20B-213ENST00000488973 TRPC7Q9HCX4 862 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 GTSE1Q9NYZ3 720 aa19.68■□□□□ 0.74
HMG20B-213ENST00000488973 UBQLN1Q9UMX0 589 aaKnown RBP19.68■□□□□ 0.74
HMG20B-213ENST00000488973 FAM95CA0A1B0GW59 222 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 PRORSD1PA6NEY8 169 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 PSMD12O00232 456 aaPredicted RBP19.67■□□□□ 0.74
HMG20B-213ENST00000488973 KPNA2P52292 529 aaKnown RBP19.67■□□□□ 0.74
HMG20B-213ENST00000488973 SPIDRQ14159 915 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 FASTKQ14296 549 aaKnown RBP19.67■□□□□ 0.74
HMG20B-213ENST00000488973 PSMD5Q16401 504 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 ALKAL1Q6UXT8 129 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 TRIM67Q6ZTA4 783 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 CEP97Q8IW35 865 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 AFAP1L2Q8N4X5 818 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 ANKFN1Q8N957 763 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 TXNDC5Q8NBS9 432 aaKnown RBP19.67■□□□□ 0.74
HMG20B-213ENST00000488973 OMDQ99983 421 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 MEAF6Q9HAF1 191 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 ARHGEF38Q9NXL2 777 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 POLR2AP24928 1970 aaKnown RBP19.67■□□□□ 0.74
HMG20B-213ENST00000488973 FGFR3P22607 806 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 ATP5F1P24539 256 aaPredicted RBP19.67■□□□□ 0.74
HMG20B-213ENST00000488973 NDST2P52849 883 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 LAMC2Q13753 1193 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 KCTD2Q14681 263 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 PCID2Q5JVF3 399 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 SAMD4BQ5PRF9 694 aaKnown RBP19.67■□□□□ 0.74
HMG20B-213ENST00000488973 ZNF618Q5T7W0 954 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 HMBOX1Q6NT76 420 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 PPP4R4Q6NUP7 873 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 PKN3Q6P5Z2 889 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 SLC27A1Q6PCB7 646 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 CNSTQ6PJW8 725 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 PTAR1Q7Z6K3 402 aaPredicted RBP19.67■□□□□ 0.74
HMG20B-213ENST00000488973 KLHDC8BQ8IXV7 354 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 RNF169Q8NCN4 708 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 APPL2Q8NEU8 664 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 ZNF560Q96MR9 790 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 VPS45Q9NRW7 570 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 TMEM181Q9P2C4 612 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 MYLKQ15746 1914 aa19.67■□□□□ 0.74
HMG20B-213ENST00000488973 A0A087X1B8 175 aa19.66■□□□□ 0.74
HMG20B-213ENST00000488973 KANSL1LA0AUZ9 987 aa19.66■□□□□ 0.74
HMG20B-213ENST00000488973 CD4P01730 458 aa19.66■□□□□ 0.74
HMG20B-213ENST00000488973 HOXA11P31270 313 aaPredicted RBP19.66■□□□□ 0.74
HMG20B-213ENST00000488973 NUP107P57740 925 aa19.66■□□□□ 0.74
HMG20B-213ENST00000488973 ZNF460Q14592 562 aa19.66■□□□□ 0.74
HMG20B-213ENST00000488973 NHSL2Q5HYW2 709 aa19.66■□□□□ 0.74
HMG20B-213ENST00000488973 FAM45BPQ6NSW5 357 aa19.66■□□□□ 0.74
HMG20B-213ENST00000488973 HACD2Q6Y1H2 254 aa19.66■□□□□ 0.74
HMG20B-213ENST00000488973 GADL1Q6ZQY3 521 aa19.66■□□□□ 0.74
HMG20B-213ENST00000488973 LIMS2Q7Z4I7 341 aa19.66■□□□□ 0.74
HMG20B-213ENST00000488973 FNDC8Q8TC99 324 aa19.66■□□□□ 0.74
HMG20B-213ENST00000488973 FAM45AQ8TCE6 357 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms