RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 SPC25Q9HBM1 224 aa16.33■□□□□ 0.21
MCF2L-229ENST00000488765 CYTH4Q9UIA0 394 aa16.33■□□□□ 0.21
MCF2L-229ENST00000488765 CNOT11Q9UKZ1 510 aaKnown RBP16.33■□□□□ 0.21
MCF2L-229ENST00000488765 THSD7AQ9UPZ6 1657 aa16.33■□□□□ 0.21
MCF2L-229ENST00000488765 COL24A1Q17RW2 1714 aa16.33■□□□□ 0.2
MCF2L-229ENST00000488765 PCP4L1A6NKN8 68 aa16.33■□□□□ 0.2
MCF2L-229ENST00000488765 M0R3G1 203 aa16.33■□□□□ 0.2
MCF2L-229ENST00000488765 CHADO15335 359 aa16.33■□□□□ 0.2
MCF2L-229ENST00000488765 HTR1BP28222 390 aa16.33■□□□□ 0.2
MCF2L-229ENST00000488765 CCND2P30279 289 aa16.33■□□□□ 0.2
MCF2L-229ENST00000488765 MOXD1Q6UVY6 613 aa16.33■□□□□ 0.2
MCF2L-229ENST00000488765 GPD1LQ8N335 351 aa16.33■□□□□ 0.2
MCF2L-229ENST00000488765 ATP6V0D2Q8N8Y2 350 aa16.33■□□□□ 0.2
MCF2L-229ENST00000488765 ANKK1Q8NFD2 765 aa16.33■□□□□ 0.2
MCF2L-229ENST00000488765 ZNF701M0R085 212 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-229ENST00000488765 KRT7P08729 469 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 TPD52P55327 224 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-229ENST00000488765 SLC36A3Q495N2 470 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 ZNF534Q76KX8 674 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 CHURC1Q8WUH1 139 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 TTYH2Q9BSA4 534 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 UPF3AQ9H1J1 476 aaKnown RBP16.32■□□□□ 0.2
MCF2L-229ENST00000488765 FBRSL1Q9HCM7 1045 aaKnown RBP16.32■□□□□ 0.2
MCF2L-229ENST00000488765 CYP4F12Q9HCS2 524 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 ARIH1Q9Y4X5 557 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-229ENST00000488765 NEMP2A6NFY4 417 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 G3V2L1 256 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 RAD51BO15315 384 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 FOSP01100 380 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-229ENST00000488765 ZNF135P52742 658 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-229ENST00000488765 PLK1P53350 603 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 VAC14Q08AM6 782 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 DMP1Q13316 513 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-229ENST00000488765 FUT11Q495W5 492 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 R3HCC1LQ7Z5L2 792 aaKnown RBP16.32■□□□□ 0.2
MCF2L-229ENST00000488765 ADCK1Q86TW2 530 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 ZNF677Q86XU0 584 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 FAM151AQ8WW52 585 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 HDAC10Q969S8 669 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 PNPLA8Q9NP80 782 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 NGRNQ9NPE2 291 aaKnown RBP16.32■□□□□ 0.2
MCF2L-229ENST00000488765 PAK5Q9P286 719 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 GIMAP2Q9UG22 337 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 SLC39A10Q9ULF5 831 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 PAPSS1O43252 624 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-229ENST00000488765 KRT8P05787 483 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 ABCB1P08183 1280 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-229ENST00000488765 CASP2P42575 452 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 C6orf10Q5SRN2 563 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 ANKRD34AQ69YU3 496 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 HDAC11Q96DB2 347 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 ITCHQ96J02 903 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 DACH2Q96NX9 599 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 CHID1Q9BWS9 393 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 EMILIN2Q9BXX0 1053 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 PRRG3Q9BZD7 231 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 SNTG2Q9NY99 539 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 IPO11Q9UI26 975 aaKnown RBP16.32■□□□□ 0.2
MCF2L-229ENST00000488765 MFHAS1Q9Y4C4 1052 aa16.32■□□□□ 0.2
MCF2L-229ENST00000488765 ITGB5P18084 799 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 SHMT2P34897 504 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 POLD2P49005 469 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 HNRNPFP52597 415 aaKnown RBP16.31■□□□□ 0.2
MCF2L-229ENST00000488765 CDH8P55286 799 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 TRIM32Q13049 653 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 LRRC38Q5VT99 294 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 STRA8Q7Z7C7 330 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 PNPLA1Q8N8W4 532 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 ATL1Q8WXF7 558 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 CERS2Q96G23 380 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 PIWIL1Q96J94 861 aaKnown RBP16.31■□□□□ 0.2
MCF2L-229ENST00000488765 NECTIN4Q96NY8 510 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 APOL2Q9BQE5 337 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 TDRD1Q9BXT4 1180 aaKnown RBP16.31■□□□□ 0.2
MCF2L-229ENST00000488765 BEX2Q9BXY8 128 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 IL37Q9NZH6 218 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 PCDHA11Q9Y5I1 949 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 LAMB1P07942 1786 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 SSX4O60224 188 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 CLASP2O75122 1294 aaKnown RBP16.31■□□□□ 0.2
MCF2L-229ENST00000488765 SCO1O75880 301 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 KCNK2O95069 426 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 CALB1P05937 261 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 LRPAP1P30533 357 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 SERPINB9P50453 376 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 GBE1Q04446 702 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 NBPF12Q5TAG4 269 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-229ENST00000488765 KIAA0408Q6ZU52 694 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 ZNF354CQ86Y25 554 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 PLD5Q8N7P1 536 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 CELF2-AS1Q8N7Q2 184 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 BIRC7Q96CA5 298 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 CPXM1Q96SM3 734 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 NMRAL1Q9HBL8 299 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 CACNA2D2Q9NY47 1150 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 TMX2Q9Y320 296 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 SPEF1Q9Y4P9 236 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 PLIN4Q96Q06 1357 aa16.31■□□□□ 0.2
MCF2L-229ENST00000488765 CD4P01730 458 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 UBL4AP11441 157 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms