RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 DNAAF5Q86Y56 855 aa13.23□□□□□ -0.29
ATPAF2-207ENST00000488753 PSTKQ8IV42 348 aaKnown RBP13.23□□□□□ -0.29
ATPAF2-207ENST00000488753 ZNF548Q8NEK5 533 aaPredicted RBP13.23□□□□□ -0.29
ATPAF2-207ENST00000488753 BTN2A2Q8WVV5 523 aa13.23□□□□□ -0.29
ATPAF2-207ENST00000488753 ZNF641Q96N77 438 aaPredicted RBP13.23□□□□□ -0.29
ATPAF2-207ENST00000488753 NCAPGQ9BPX3 1015 aa13.23□□□□□ -0.29
ATPAF2-207ENST00000488753 EDEM3Q9BZQ6 932 aa13.23□□□□□ -0.29
ATPAF2-207ENST00000488753 KLC2Q9H0B6 622 aa13.23□□□□□ -0.29
ATPAF2-207ENST00000488753 UBA2Q9UBT2 640 aaPredicted RBP13.23□□□□□ -0.29
ATPAF2-207ENST00000488753 IPO11Q9UI26 975 aaKnown RBP13.23□□□□□ -0.29
ATPAF2-207ENST00000488753 GGT7Q9UJ14 662 aa13.23□□□□□ -0.29
ATPAF2-207ENST00000488753 ITM2BQ9Y287 266 aa13.23□□□□□ -0.29
ATPAF2-207ENST00000488753 TSPAN11A1L157 253 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 TMEM191CA6NGB0 347 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 LRRC53A6NM62 1247 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 TPP1O14773 563 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 TM7SF2O76062 418 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 RNF8O76064 485 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 PSMA2P25787 234 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 CLDN6P56747 220 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 CYTH1Q15438 398 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 ASIC2Q16515 512 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 COL28A1Q2UY09 1125 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 ERMARDQ5T6L9 678 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 ZCCHC8Q6NZY4 707 aaKnown RBP13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 C19orf48Q6RUI8 117 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 CXorf40AQ8TE69 158 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 APOLD1Q96LR9 279 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 TUBGCP5Q96RT8 1024 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 HAUS4Q9H6D7 363 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 PDFQ9HBH1 243 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 LHX3Q9UBR4 397 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 AP4E1Q9UPM8 1137 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 TRPM6Q9BX84 2022 aa13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 URB1O60287 2271 aaKnown RBP13.22□□□□□ -0.29
ATPAF2-207ENST00000488753 A0A1B0GTH6 734 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 ARHGAP42A6NI28 874 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 AQP9O43315 295 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 LZTS3O60299 673 aaPredicted RBP13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 PRAMEF11O60813 436 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 MT-CO3P00414 261 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 FTLP02792 175 aaPredicted RBP13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 MYBL1P10243 752 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 TIMP2P16035 220 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 JUNDP17535 347 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 XPAP23025 273 aaPredicted RBP13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 CSNK1DP48730 415 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 ZNF165P49910 485 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 THOP1P52888 689 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 RFTN1Q14699 578 aaPredicted RBP13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 TMEM52BQ4KMG9 183 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 ZNF542PQ5EBM4 170 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 FIGNQ5HY92 759 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 CDCP2Q5VXM1 449 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 AFMIDQ63HM1 303 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 BRAT1Q6PJG6 821 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 ZNF571Q7Z3V5 609 aaPredicted RBP13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 PDZD3Q86UT5 571 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 HNRNPLLQ8WVV9 542 aaKnown RBP13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 TRIM11Q96F44 468 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 SUV39H2Q9H5I1 410 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 DHX35Q9H5Z1 703 aaKnown RBP13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 SPASTQ9UBP0 616 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 KLF15Q9UIH9 416 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 SALL4Q9UJQ4 1053 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 AK5Q9Y6K8 562 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 SCINQ9Y6U3 715 aa13.21□□□□□ -0.29
ATPAF2-207ENST00000488753 ITPR1Q14643 2758 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 DOCK9Q9BZ29 2069 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 LY6G6EA0A0G2JKS1 128 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 TMEM110-MUSTN1A8MSY1 372 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 TMCO5BA8MYB1 307 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 EEF2KO00418 725 aaKnown RBP13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 PRPSAP2O60256 369 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 OPA1O60313 960 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 MMP20O60882 483 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 IGFALSP35858 605 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 HCAR3P49019 387 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 PEX5P50542 639 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 KLHL30Q0D2K2 578 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 EIF2B5Q13144 721 aaKnown RBP13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 ACAP1Q15027 740 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 UGP2Q16851 508 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 TPRG1LQ5T0D9 272 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 ERAP2Q6P179 960 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 MACC1Q6ZN28 852 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 RFX8Q6ZV50 586 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 VPS36Q86VN1 386 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 ARFGAP1Q8N6T3 406 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 TP53I13Q8NBR0 393 aaPredicted RBP13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 SNIP1Q8TAD8 396 aaKnown RBP13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 DEPDC7Q96QD5 511 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 SNRNP25Q9BV90 132 aaKnown RBP13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 SLC39A8Q9C0K1 460 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 MRPL47Q9HD33 250 aaKnown RBP13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 GPATCH2LQ9NWQ4 482 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 U3KQA8 63 aa13.2□□□□□ -0.3
ATPAF2-207ENST00000488753 CFAP69A5D8W1 941 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 LMO7DNF2Z398 122 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 J3KR12 359 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms