RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 ERLEC1Q96DZ1 483 aa19.63■□□□□ 0.73
CCM2-216ENST00000488727 SELENOSQ9BQE4 189 aa19.63■□□□□ 0.73
CCM2-216ENST00000488727 CXorf51AA0A1B0GTR3 108 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 A0A1W2PQF6 199 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 ATP9BO43861 1147 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 PEX11BO96011 259 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 VAV1P15498 845 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 COL9A1P20849 921 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 MAGEA4P43358 317 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 SLC20A2Q08357 652 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 GPS1Q13098 491 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 KIAA1211LQ6NV74 962 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 TMEM92Q6UXU6 159 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 SYT13Q7L8C5 426 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 YTHDF3Q7Z739 585 aaKnown RBP19.62■□□□□ 0.73
CCM2-216ENST00000488727 EXOC3L1Q86VI1 746 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 RIBC1Q8N443 379 aaPredicted RBP19.62■□□□□ 0.73
CCM2-216ENST00000488727 MDM1Q8TC05 714 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 ACTL9Q8TC94 416 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 P3H4Q92791 437 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 PWWP2AQ96N64 755 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 RBM15Q96T37 977 aaKnown RBP eCLIP19.62■□□□□ 0.73
CCM2-216ENST00000488727 SP110Q9HB58 689 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 CD248Q9HCU0 757 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 FCF1Q9Y324 198 aaKnown RBP19.62■□□□□ 0.73
CCM2-216ENST00000488727 CACNA1IQ9P0X4 2223 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 APOC4-APOC2K7ER74 178 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 ATG13O75143 517 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 ZNF821O75541 412 aaPredicted RBP19.62■□□□□ 0.73
CCM2-216ENST00000488727 APOC2P02655 101 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 EPHX1P07099 455 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 ZSCAN5DPP0CG00 497 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 HOXB2P14652 356 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 AVPR2P30518 371 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 NNMTP40261 264 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 NR2C2P49116 596 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 IL10RBQ08334 325 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 E2F5Q15329 346 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 DLG2Q15700 870 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 CRY1Q16526 586 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 HNRNPA1L2Q32P51 320 aaKnown RBP19.62■□□□□ 0.73
CCM2-216ENST00000488727 TMEM31Q5JXX7 168 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 EOGTQ5NDL2 527 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 HDAC11Q96DB2 347 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 LGMNQ99538 433 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 CCDC77Q9BR77 488 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 IER2Q9BTL4 223 aa19.62■□□□□ 0.73
CCM2-216ENST00000488727 MX2P20592 715 aa19.61■□□□□ 0.73
CCM2-216ENST00000488727 GEMIN4P57678 1058 aaKnown RBP19.61■□□□□ 0.73
CCM2-216ENST00000488727 SATB1Q01826 763 aa19.61■□□□□ 0.73
CCM2-216ENST00000488727 ACCSLQ4AC99 568 aa19.61■□□□□ 0.73
CCM2-216ENST00000488727 SDE2Q6IQ49 451 aa19.61■□□□□ 0.73
CCM2-216ENST00000488727 C22orf39Q6P5X5 142 aa19.61■□□□□ 0.73
CCM2-216ENST00000488727 LRRC49Q8IUZ0 686 aa19.61■□□□□ 0.73
CCM2-216ENST00000488727 PTPRN2Q92932 1015 aa19.61■□□□□ 0.73
CCM2-216ENST00000488727 CHMP6Q96FZ7 201 aa19.61■□□□□ 0.73
CCM2-216ENST00000488727 TMEM121Q9BTD3 319 aa19.61■□□□□ 0.73
CCM2-216ENST00000488727 C1QTNF1Q9BXJ1 281 aa19.61■□□□□ 0.73
CCM2-216ENST00000488727 EURLQ9NYK6 297 aa19.61■□□□□ 0.73
CCM2-216ENST00000488727 UBA2Q9UBT2 640 aaPredicted RBP19.61■□□□□ 0.73
CCM2-216ENST00000488727 FARP1Q9Y4F1 1045 aaPredicted RBP19.61■□□□□ 0.73
CCM2-216ENST00000488727 A0A087WUV0 522 aaPredicted RBP19.6■□□□□ 0.73
CCM2-216ENST00000488727 SMAPO00193 183 aa19.6■□□□□ 0.73
CCM2-216ENST00000488727 CDH16O75309 829 aa19.6■□□□□ 0.73
CCM2-216ENST00000488727 TMCC1O94876 653 aa19.6■□□□□ 0.73
CCM2-216ENST00000488727 ETS1P14921 441 aa19.6■□□□□ 0.73
CCM2-216ENST00000488727 DRD4P21917 467 aa19.6■□□□□ 0.73
CCM2-216ENST00000488727 PPIDQ08752 370 aaKnown RBP19.6■□□□□ 0.73
CCM2-216ENST00000488727 NOMO1Q15155 1222 aa19.6■□□□□ 0.73
CCM2-216ENST00000488727 INO80DQ53TQ3 878 aaPredicted RBP19.6■□□□□ 0.73
CCM2-216ENST00000488727 MAMSTRQ6ZN01 415 aa19.6■□□□□ 0.73
CCM2-216ENST00000488727 Q6ZVU0 165 aa19.6■□□□□ 0.73
CCM2-216ENST00000488727 PRCCQ92733 491 aaPredicted RBP19.6■□□□□ 0.73
CCM2-216ENST00000488727 ZNF419Q96HQ0 510 aaPredicted RBP19.6■□□□□ 0.73
CCM2-216ENST00000488727 TSGA13Q96PP4 275 aa19.6■□□□□ 0.73
CCM2-216ENST00000488727 ZNF317Q96PQ6 595 aaPredicted RBP19.6■□□□□ 0.73
CCM2-216ENST00000488727 SAYSD1Q9NPB0 183 aa19.6■□□□□ 0.73
CCM2-216ENST00000488727 INTS9Q9NV88 658 aaKnown RBP19.6■□□□□ 0.73
CCM2-216ENST00000488727 SPATA6Q9NWH7 488 aaPredicted RBP19.6■□□□□ 0.73
CCM2-216ENST00000488727 ACTL7BQ9Y614 415 aa19.6■□□□□ 0.73
CCM2-216ENST00000488727 SLC10A7Q0GE19 358 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 PDK1Q15118 436 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 CYTH1Q15438 398 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 ZC3H18Q86VM9 953 aaKnown RBP19.59■□□□□ 0.73
CCM2-216ENST00000488727 CCNYQ8ND76 341 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 C9orf72Q96LT7 481 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 TNKS2Q9H2K2 1166 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 PPCSQ9HAB8 311 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 PRSS16Q9NQE7 514 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 ZNF318Q5VUA4 2279 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 ALOX15BO15296 676 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 SIN3BO75182 1162 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 CCNCP24863 283 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 CAMK2GQ13555 558 aaPredicted RBP19.59■□□□□ 0.73
CCM2-216ENST00000488727 FAM182AQ5T1J6 154 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 C9orf64Q5T6V5 341 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 TMCO4Q5TGY1 634 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 C6orf89Q6UWU4 347 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 TDRPQ86YL5 185 aa19.59■□□□□ 0.73
CCM2-216ENST00000488727 DTWD2Q8NBA8 298 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms