RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 MAP7D3Q8IWC1 876 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 SKA1Q96BD8 255 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 ZNF641Q96N77 438 aaPredicted RBP16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 TUBGCP5Q96RT8 1024 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 CALN1Q9BXU9 219 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 SLC17A9Q9BYT1 436 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 SUV39H2Q9H5I1 410 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 FZD3Q9NPG1 666 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 SEPT3Q9UH03 358 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 TFR2Q9UP52 801 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 PCDHA13Q9Y5I0 950 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 A0A1B0GTQ1 180 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 IGLON5A6NGN9 336 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 SOWAHDA6NJG2 315 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 RAD51BO15315 384 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 MFSD11O43934 449 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 PCDHGA12O60330 932 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 PAK4O96013 591 aaPredicted RBP16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 SLC1A1P43005 524 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 OVGP1Q12889 678 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 SLC10A2Q12908 348 aaPredicted RBP16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 STAT4Q14765 748 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 GRM3Q14832 879 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 LRRC73Q5JTD7 316 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 LRRC38Q5VT99 294 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 CAMK1DQ8IU85 385 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 LRRC49Q8IUZ0 686 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 NAXDQ8IW45 347 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 PGBD5Q8N414 524 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 BMFQ96LC9 184 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 RNF157Q96PX1 679 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 ELF4Q99607 663 aaPredicted RBP16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 KLF6Q99612 283 aaPredicted RBP16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 CINPQ9BW66 212 aaPredicted RBP16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 SLC32A1Q9H598 525 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 ERVMER34-1Q9H9K5 563 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 HYOU1Q9Y4L1 999 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 EPN1Q9Y6I3 576 aaPredicted RBP16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 PCNX2A6NKB5 2137 aa16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 NYNRINQ9P2P1 1898 aaKnown RBP16.12■□□□□ 0.17
CTDSP1-209ENST00000488627 CABIN1Q9Y6J0 2220 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 TTC24A2A3L6 582 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 RCCD1A6NED2 376 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 ZNF487B1APH4 448 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 TRAFD1O14545 582 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 DFNA5O60443 496 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 COMTP21964 271 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 KCNA4P22459 653 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 HNRNPA2B1P22626 353 aaKnown RBP16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 CLDN2P57739 230 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 GALNT2Q10471 571 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 UGP2Q16851 508 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 SLC45A4Q5BKX6 768 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 GCNT7Q6ZNI0 430 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 ABI3BPQ7Z7G0 1075 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 ZSCAN30Q86W11 494 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 TMTC1Q8IUR5 882 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 ASB12Q8WXK4 309 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 ECHDC3Q96DC8 303 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 LENG8Q96PV6 779 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 MYOCQ99972 504 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 GDF3Q9NR23 364 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 SALL4Q9UJQ4 1053 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 PCOLCE2Q9UKZ9 415 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 REXO2Q9Y3B8 237 aaKnown RBP16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 HS3ST3A1Q9Y663 406 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 ADAMTS9Q9P2N4 1935 aa16.11■□□□□ 0.17
CTDSP1-209ENST00000488627 NDUFA10O95299 355 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 MAP3K6O95382 1288 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 PMLP29590 882 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 AKT2P31751 481 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 GARSP41250 739 aaKnown RBP16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 RXRGP48443 463 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 SCNN1BP51168 640 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 RENBPP51606 427 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 SUOXP51687 545 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 GBE1Q04446 702 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 SPA17Q15506 151 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 TMEM52BQ4KMG9 183 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 BRAT1Q6PJG6 821 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 RAD9BQ6WBX8 426 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 VSIG1Q86XK7 387 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 ATPAF2Q8N5M1 289 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 TEX26Q8N6G2 289 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 BAHD1Q8TBE0 780 aaPredicted RBP16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 SPOCK2Q92563 424 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 MAML1Q92585 1016 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 KLHDC7BQ96G42 594 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 TSGA13Q96PP4 275 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 MGME1Q9BQP7 344 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 PCDH12Q9NPG4 1184 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 GPR27Q9NS67 375 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 WASF3Q9UPY6 502 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 BTBD3Q9Y2F9 522 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 ALG6Q9Y672 507 aa16.1■□□□□ 0.17
CTDSP1-209ENST00000488627 A0A0A6YYK5 440 aaPredicted RBP16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 SPAARA0A1B0GVQ0 90 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 LRRD1A4D1F6 860 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 POM121BA6NF01 834 aa16.09■□□□□ 0.17
CTDSP1-209ENST00000488627 NEMP1O14524 444 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms