RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 hCG_1818297A0A087WSY0 165 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 A0A1W2PQU0 124 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 KRT10P13645 584 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 MX2P20592 715 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 CTNNA2P26232 953 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 MAT2AP31153 395 aaKnown RBP16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 RENBPP51606 427 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 LIMK1P53667 647 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 MAXP61244 160 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 AP1S1P61966 158 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 BNC1Q01954 994 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 PPIDQ08752 370 aaKnown RBP16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 GRIK2Q13002 908 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 LLGL1Q15334 1064 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 TMEM259Q4ZIN3 620 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 MARC1Q5VT66 337 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 SEL1L3Q68CR1 1132 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 TIGD7Q6NT04 549 aaPredicted RBP16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 NEK5Q6P3R8 708 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 NPNTQ6UXI9 565 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 NT5DC3Q86UY8 548 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 HORMAD1Q86X24 394 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 ZSWIM9Q86XI8 627 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 CAMK1DQ8IU85 385 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 TEX26Q8N6G2 289 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 EXD1Q8NHP7 514 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 KIAA1524Q8TCG1 905 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 NSMCE1Q8WV22 266 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 FATE1Q969F0 183 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 RAB7BQ96AH8 199 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 ZNF830Q96NB3 372 aaPredicted RBP16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 MAK16Q9BXY0 300 aaKnown RBP16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 ATP13A3Q9H7F0 1226 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 ZFR2Q9UPR6 939 aaKnown RBP16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 PCDHA3Q9Y5H8 950 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 CAPN6Q9Y6Q1 641 aa16.18■□□□□ 0.18
ERGIC3-216ENST00000488384 TTC24A2A3L6 582 aaPredicted RBP16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 ARHGAP33O14559 1287 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 CDX4O14627 284 aaPredicted RBP16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 WNT9AO14904 365 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 AREL1O15033 823 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 MATN3O15232 486 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 PCDH8O95206 1070 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 ZRANB2O95218 330 aaKnown RBP eCLIP16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 PECAM1P16284 738 aaPredicted RBP16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 ZFXP17010 805 aaPredicted RBP16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 CCNCP24863 283 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 MAPK8P45983 427 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 GRIA4P48058 902 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 CSNK1EP49674 416 aaKnown RBP16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 SCNN1BP51168 640 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 AFF3P51826 1226 aaKnown RBP16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 ADCY2Q08462 1091 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 HNRNPDQ14103 355 aaKnown RBP16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 PPP2R5EQ16537 467 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 ZNF284Q2VY69 593 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 TFDP3Q5H9I0 405 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 STPG1Q5TH74 334 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 CCDC50Q8IVM0 306 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 RCOR2Q8IZ40 523 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 BBS5Q8N3I7 341 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 ALG3Q92685 438 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 ECHDC3Q96DC8 303 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 RBM41Q96IZ5 413 aaKnown RBP16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 ZNF641Q96N77 438 aaPredicted RBP16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 NUDCD1Q96RS6 583 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 LGMNQ99538 433 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 SUV39H2Q9H5I1 410 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 NT5MQ9NPB1 228 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 CDV3Q9UKY7 258 aaKnown RBP16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 DOCK9Q9BZ29 2069 aa16.17■□□□□ 0.18
ERGIC3-216ENST00000488384 A0A1B0GVT2 93 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 CCDC66A2RUB6 948 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 UPK3BL1B0FP48 263 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 UPK3BL2E5RIL1 263 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 SLC30A4O14863 429 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 CST8O60676 142 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 TIMP2P16035 220 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 PRLRP16471 622 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 SERPINA4P29622 427 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 NUDT1P36639 197 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 PEX5P50542 639 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 RACK1P63244 317 aaKnown RBP16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 TFDP2Q14188 446 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 SETMARQ53H47 684 aaPredicted RBP16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 KAZNQ674X7 775 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 ALG1LQ6GMV1 187 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 NAPEPLDQ6IQ20 393 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 KIAA1161Q6NSJ0 714 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 PRPF39Q86UA1 669 aaKnown RBP16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 CCDC13Q8IYE1 715 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 CCNYQ8ND76 341 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 OR2I1PQ8NGU4 316 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 HCAR2Q8TDS4 363 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 SERAC1Q96JX3 654 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 GTPBP2Q9BX10 602 aaKnown RBP16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 TSGA10Q9BZW7 698 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 NOD2Q9HC29 1040 aa16.16■□□□□ 0.18
ERGIC3-216ENST00000488384 TMEM9BQ9NQ34 198 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms