RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 HNRNPKP61978 463 aaKnown RBP eCLIP19.56■□□□□ 0.72
CD55-209ENST00000488171 KLHL30Q0D2K2 578 aa19.56■□□□□ 0.72
CD55-209ENST00000488171 TARDBPQ13148 414 aaKnown RBP eCLIP19.56■□□□□ 0.72
CD55-209ENST00000488171 PARGQ86W56 976 aa19.56■□□□□ 0.72
CD55-209ENST00000488171 RFFLQ8WZ73 363 aa19.56■□□□□ 0.72
CD55-209ENST00000488171 EIF3CQ99613 913 aaKnown RBP19.56■□□□□ 0.72
CD55-209ENST00000488171 EDEM3Q9BZQ6 932 aa19.56■□□□□ 0.72
CD55-209ENST00000488171 SLC39A8Q9C0K1 460 aa19.56■□□□□ 0.72
CD55-209ENST00000488171 DONSONQ9NYP3 566 aa19.56■□□□□ 0.72
CD55-209ENST00000488171 NLGN3Q9NZ94 848 aa19.56■□□□□ 0.72
CD55-209ENST00000488171 LHX6Q9UPM6 363 aa19.56■□□□□ 0.72
CD55-209ENST00000488171 GOLGA4Q13439 2230 aaKnown RBP19.55■□□□□ 0.72
CD55-209ENST00000488171 MYLKQ15746 1914 aa19.55■□□□□ 0.72
CD55-209ENST00000488171 SCAMP1O15126 338 aa19.55■□□□□ 0.72
CD55-209ENST00000488171 MMP20O60882 483 aa19.55■□□□□ 0.72
CD55-209ENST00000488171 PIGNO95427 931 aa19.55■□□□□ 0.72
CD55-209ENST00000488171 SERPINC1P01008 464 aa19.55■□□□□ 0.72
CD55-209ENST00000488171 NME1P15531 152 aaKnown RBP19.55■□□□□ 0.72
CD55-209ENST00000488171 MIPP30301 263 aa19.55■□□□□ 0.72
CD55-209ENST00000488171 IGFALSP35858 605 aa19.55■□□□□ 0.72
CD55-209ENST00000488171 PAPOLAP51003 745 aaKnown RBP19.55■□□□□ 0.72
CD55-209ENST00000488171 INSM1Q01101 510 aaPredicted RBP19.55■□□□□ 0.72
CD55-209ENST00000488171 PDE1CQ14123 709 aaPredicted RBP19.55■□□□□ 0.72
CD55-209ENST00000488171 FIGNQ5HY92 759 aa19.55■□□□□ 0.72
CD55-209ENST00000488171 AFMIDQ63HM1 303 aa19.55■□□□□ 0.72
CD55-209ENST00000488171 RFX8Q6ZV50 586 aa19.55■□□□□ 0.72
CD55-209ENST00000488171 ZNF653Q96CK0 615 aa19.55■□□□□ 0.72
CD55-209ENST00000488171 ADAMTS20P59510 1910 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 LY6G6EA0A0G2JKS1 128 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 TSPAN11A1L157 253 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 PRPSAP2O60256 369 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 LRCH4O75427 683 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 NEBLO76041 1014 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 TM7SF2O76062 418 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 RNF8O76064 485 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 CKMT1AP12532 417 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 DAB2P98082 770 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 EIF2B5Q13144 721 aaKnown RBP19.54■□□□□ 0.72
CD55-209ENST00000488171 HS1BP3Q53T59 392 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 C19orf48Q6RUI8 117 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 ARHGAP12Q8IWW6 846 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 NPWQ8N729 165 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 ZNF548Q8NEK5 533 aaPredicted RBP19.54■□□□□ 0.72
CD55-209ENST00000488171 HCAR2Q8TDS4 363 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 CXorf40AQ8TE69 158 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 APOLD1Q96LR9 279 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 ISCUQ9H1K1 167 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 IPO11Q9UI26 975 aaKnown RBP19.54■□□□□ 0.72
CD55-209ENST00000488171 SCINQ9Y6U3 715 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 U3KQA8 63 aa19.54■□□□□ 0.72
CD55-209ENST00000488171 DSPP15924 2871 aaKnown RBP19.53■□□□□ 0.72
CD55-209ENST00000488171 CELSR3Q9NYQ7 3312 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 NEMP2A6NFY4 417 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 ARHGAP42A6NI28 874 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 K7ESM1 405 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 ALPPL2P10696 532 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 MYF5P13349 255 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 ERCC2P18074 760 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 RGRP47804 291 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 TMEM52BQ4KMG9 183 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 PPP6R3Q5H9R7 873 aaPredicted RBP19.53■□□□□ 0.72
CD55-209ENST00000488171 HGSNATQ68CP4 663 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 VPS36Q86VN1 386 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 PSTKQ8IV42 348 aaKnown RBP19.53■□□□□ 0.72
CD55-209ENST00000488171 CACTIN-AS1Q8N1I8 211 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 FAM181AQ8N9Y4 354 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 TP53I13Q8NBR0 393 aaPredicted RBP19.53■□□□□ 0.72
CD55-209ENST00000488171 NXPE2Q96DL1 559 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 NCAPGQ9BPX3 1015 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 WRAP53Q9BUR4 548 aaKnown RBP19.53■□□□□ 0.72
CD55-209ENST00000488171 SUV39H2Q9H5I1 410 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 CBX8Q9HC52 389 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 MBNL1Q9NR56 388 aaKnown RBP19.53■□□□□ 0.72
CD55-209ENST00000488171 MYO1AQ9UBC5 1043 aa19.53■□□□□ 0.72
CD55-209ENST00000488171 PNMA8BQ9ULN7 279 aaPredicted RBP19.53■□□□□ 0.72
CD55-209ENST00000488171 SYCE3A1L190 88 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 H3BM21 787 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 DAPK3O43293 454 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 BUB1BO60566 1050 aaPredicted RBP19.52■□□□□ 0.72
CD55-209ENST00000488171 MYBL1P10243 752 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 JUNDP17535 347 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 PBX1P40424 430 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 SUOXP51687 545 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 E2F1Q01094 437 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 GRM3Q14832 879 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 UGP2Q16851 508 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 KLHL40Q2TBA0 621 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 ARHGAP36Q6ZRI8 547 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 LUZP1Q86V48 1076 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 ZSWIM9Q86XI8 627 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 DCBLD1Q8N8Z6 715 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 TRIM11Q96F44 468 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 DUSP23Q9BVJ7 150 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 CWC15Q9P013 229 aaKnown RBP19.52■□□□□ 0.72
CD55-209ENST00000488171 CLCA2Q9UQC9 943 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 CSNK1G3Q9Y6M4 447 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 LAMA5O15230 3695 aa19.52■□□□□ 0.72
CD55-209ENST00000488171 ANKRD11Q6UB99 2663 aaPredicted RBP19.52■□□□□ 0.71
CD55-209ENST00000488171 LRRK1Q38SD2 2015 aa19.51■□□□□ 0.71
CD55-209ENST00000488171 IL1R2P27930 398 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms