RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 PCDH19Q8TAB3 1148 aa13.89□□□□□ -0.19
COPS7B-221ENST00000488111 CPT1BQ92523 772 aa13.89□□□□□ -0.19
COPS7B-221ENST00000488111 TIFAQ96CG3 184 aa13.89□□□□□ -0.19
COPS7B-221ENST00000488111 ZFRQ96KR1 1074 aaKnown RBP13.89□□□□□ -0.19
COPS7B-221ENST00000488111 RNF157Q96PX1 679 aa13.89□□□□□ -0.19
COPS7B-221ENST00000488111 CYP2S1Q96SQ9 504 aa13.89□□□□□ -0.19
COPS7B-221ENST00000488111 MRPS26Q9BYN8 205 aaKnown RBP13.89□□□□□ -0.19
COPS7B-221ENST00000488111 RNF38Q9H0F5 515 aa13.89□□□□□ -0.19
COPS7B-221ENST00000488111 IL21Q9HBE4 155 aa13.89□□□□□ -0.19
COPS7B-221ENST00000488111 TRPC7Q9HCX4 862 aa13.89□□□□□ -0.19
COPS7B-221ENST00000488111 SORCS3Q9UPU3 1222 aa13.89□□□□□ -0.19
COPS7B-221ENST00000488111 HCFC2Q9Y5Z7 792 aa13.89□□□□□ -0.19
COPS7B-221ENST00000488111 PLXNA3P51805 1871 aa13.89□□□□□ -0.19
COPS7B-221ENST00000488111 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.88□□□□□ -0.19
COPS7B-221ENST00000488111 MEI4A8MW99 385 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 COCHO43405 550 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 MAP3K6O95382 1288 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 F11P03951 625 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 ATP5C1P36542 298 aaKnown RBP13.88□□□□□ -0.19
COPS7B-221ENST00000488111 CYP4F8P98187 520 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 HSP90AA5PQ58FG0 334 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 ATG16L1Q676U5 607 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 TXNDC8Q6A555 127 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 NETO2Q8NC67 525 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 ICA1LQ8NDH6 482 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 SLC44A1Q8WWI5 657 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 OVCA2Q8WZ82 227 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 NTAN1Q96AB6 310 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 OLA1Q9NTK5 396 aaKnown RBP13.88□□□□□ -0.19
COPS7B-221ENST00000488111 TLR6Q9Y2C9 796 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 COL4A4P53420 1690 aaPredicted RBP13.88□□□□□ -0.19
COPS7B-221ENST00000488111 PAGE1O75459 146 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 SRGAP2BP0DMP2 458 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 MYL4P12829 197 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 FDFT1P37268 417 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 NRIP1P48552 1158 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 KCNQ1P51787 676 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 ALDH18A1P54886 795 aaKnown RBP13.88□□□□□ -0.19
COPS7B-221ENST00000488111 AQP5P55064 265 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 CBX3Q13185 183 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 TLR1Q15399 786 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 TRIP10Q15642 601 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 OGFRL1Q5TC84 451 aaPredicted RBP13.88□□□□□ -0.19
COPS7B-221ENST00000488111 CES4AQ5XG92 561 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 BORAQ6PGQ7 559 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 GAREM2Q75VX8 874 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 PALM2Q8IXS6 379 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 ELMOD1Q8N336 334 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 CCDC33Q8N5R6 958 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 PQLC3Q8N755 202 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 ZFP28Q8NHY6 868 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.88□□□□□ -0.19
COPS7B-221ENST00000488111 SLC26A7Q8TE54 656 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 GFM2Q969S9 779 aaKnown RBP13.88□□□□□ -0.19
COPS7B-221ENST00000488111 FCRL2Q96LA5 508 aaPredicted RBP13.88□□□□□ -0.19
COPS7B-221ENST00000488111 CSPG4P5Q96PW8 444 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 SLC22A12Q96S37 553 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 GKN1Q9NS71 199 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 DDX18Q9NVP1 670 aaKnown RBP13.88□□□□□ -0.19
COPS7B-221ENST00000488111 ARHGEF38Q9NXL2 777 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 UXTQ9UBK9 157 aaPredicted RBP13.88□□□□□ -0.19
COPS7B-221ENST00000488111 OR12D3Q9UGF7 316 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 MFHAS1Q9Y4C4 1052 aa13.88□□□□□ -0.19
COPS7B-221ENST00000488111 A0A1W2PRU2 124 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 ARHGAP42A6NI28 874 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 SDR42E2A6NKP2 422 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 TXNDC9O14530 226 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 HNRNPCP07910 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
COPS7B-221ENST00000488111 CPA3P15088 417 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 ARL4AP40617 200 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 SERPINB8P50452 374 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 GALK1P51570 392 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 PLOD1Q02809 727 aaPredicted RBP13.87□□□□□ -0.19
COPS7B-221ENST00000488111 SCAPQ12770 1279 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 UBAP2LQ14157 1087 aaKnown RBP13.87□□□□□ -0.19
COPS7B-221ENST00000488111 MYLK3Q32MK0 819 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 PDE12Q6L8Q7 609 aaKnown RBP13.87□□□□□ -0.19
COPS7B-221ENST00000488111 TMC8Q8IU68 726 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 TTC16Q8NEE8 873 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 SLC35B2Q8TB61 432 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 LRRN4Q8WUT4 740 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 ABTB1Q969K4 478 aaPredicted RBP13.87□□□□□ -0.19
COPS7B-221ENST00000488111 SLC39A13Q96H72 371 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 SRPK1Q96SB4 655 aaKnown RBP13.87□□□□□ -0.19
COPS7B-221ENST00000488111 ZNF670Q9BS34 389 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 LRRC3Q9BY71 257 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 ATXN3LQ9H3M9 355 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 C10orf88Q9H8K7 445 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 SIRPGQ9P1W8 387 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 DNMT3LQ9UJW3 386 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 SH3GLB1Q9Y371 365 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 HBS1LQ9Y450 684 aaKnown RBP13.87□□□□□ -0.19
COPS7B-221ENST00000488111 KCNU1A8MYU2 1149 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 H3BNX3 289 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 SGK1O00141 431 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 EEF2KO00418 725 aaKnown RBP13.87□□□□□ -0.19
COPS7B-221ENST00000488111 IFNB1P01574 187 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 SLC25A3Q00325 362 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 BRMS1LQ5PSV4 323 aa13.87□□□□□ -0.19
COPS7B-221ENST00000488111 FAM182AQ5T1J6 154 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms