RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 MAP7D2Q96T17 732 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 YME1L1Q96TA2 773 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 LBHD1Q9BQE6 289 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 HEMGNQ9BXL5 484 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 NPFFR1Q9GZQ6 430 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 MVB12BQ9H7P6 319 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 SMC4Q9NTJ3 1288 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 SPATS2LQ9NUQ6 558 aaKnown RBP4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 KCND2Q9NZV8 630 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 MPP6Q9NZW5 540 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 NRBP1Q9UHY1 535 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 FBXO9Q9UK97 447 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 SMARCA2P51531 1590 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 ADGRF5Q8IZF2 1346 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 A0A0U1RQG5 324 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 F5H0A9 414 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 INO80B-WBP1J3KQ70 363 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 TNFRSF13BO14836 293 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 TMEM63AO94886 807 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 ARSBP15848 533 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 ZNF8P17098 575 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 PTPN2P17706 415 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 LMO1P25800 156 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 CENPAP49450 140 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 CTCFP49711 727 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 TERF1P54274 439 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 ZP1P60852 638 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 LMOD3Q0VAK6 560 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 NEXNQ0ZGT2 675 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 HNRNPA0Q13151 305 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 LEXMQ3ZCV2 418 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 SLC9B1Q4ZJI4 515 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 HYIQ5T013 277 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 H1FNTQ75WM6 255 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 DENND6AQ8IWF6 608 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 KLHL29Q96CT2 875 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 C7orf26Q96N11 449 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 CDT1Q9H211 546 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 C20orf141Q9NUB4 165 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 SARDHQ9UL12 918 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 SRPRBQ9Y5M8 271 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 INSL5Q9Y5Q6 135 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 TTC3P53804 2025 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 CEP164Q9UPV0 1460 aa4.05□□□□□ -1.76
ECHDC1-217ENST00000488087 CBY3A6NI87 242 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 KDM4EB2RXH2 506 aaPredicted RBP4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 MS4A18H0YCH9 400 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 EBAG9O00559 213 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 TCERG1O14776 1098 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 LIASO43766 372 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 BAIAP3O94812 1187 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 CD4P01730 458 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 CBSLP0DN79 551 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 HOXB2P14652 356 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 ABCD1P33897 745 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 TTKP33981 857 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 CBSP35520 551 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 RXRGP48443 463 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 HARS2P49590 506 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 HDAC4P56524 1084 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 LPIN1Q14693 890 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 PPP2R5BQ15173 497 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 PRICKLE4Q2TBC4 344 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 PLEKHO1Q53GL0 409 aaPredicted RBP4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 WDR78Q5VTH9 848 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 ATF7IPQ6VMQ6 1270 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 MON1BQ7L1V2 547 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 R3HCC1LQ7Z5L2 792 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 TECPR1Q7Z6L1 1165 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 PCGF5Q86SE9 256 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 RBFAQ8N0V3 343 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 MIGA1Q8NAN2 632 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 MCPH1Q8NEM0 835 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 NSMCE1Q8WV22 266 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 OTULINQ96BN8 352 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 SAAL1Q96ER3 474 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 BBS4Q96RK4 519 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 SF3B5Q9BWJ5 86 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 PLAC1Q9HBJ0 212 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 OLA1Q9NTK5 396 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 HSPB7Q9UBY9 170 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 CARD8Q9Y2G2 431 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 TNFRSF18Q9Y5U5 241 aa4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 EIF4G1Q04637 1599 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-217ENST00000488087 PEG3Q9GZU2 1588 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 A0A087X0M5 115 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 A0A1B0GX30 115 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 A0A1W2PPH5 198 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 CD8B2A6NJW9 211 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 TTC36A6NLP5 189 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 HSPB2A8KAH6 182 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 BECN2A8MW95 431 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 I6L893 689 aaPredicted RBP4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 CHL1O00533 1208 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 LDB2O43679 373 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 ITM2AO43736 263 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 RTN3O95197 1032 aaPredicted RBP4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 DDX58O95786 925 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 TBX18O95935 607 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms