RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 ANKRD10Q9NXR5 420 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 IFT80Q9P2H3 777 aaPredicted RBP4.09□□□□□ -1.75
CCDC66-221ENST00000487739 IGHV4OR15-8A0A075B7B6 117 aa4.08□□□□□ -1.76
CCDC66-221ENST00000487739 J3KR12 359 aa4.08□□□□□ -1.76
CCDC66-221ENST00000487739 SLC25A17O43808 307 aa4.08□□□□□ -1.76
CCDC66-221ENST00000487739 PMS2P2O95744 297 aa4.08□□□□□ -1.76
CCDC66-221ENST00000487739 ANOS1P23352 680 aa4.08□□□□□ -1.76
CCDC66-221ENST00000487739 SSTR2P30874 369 aa4.08□□□□□ -1.76
CCDC66-221ENST00000487739 PRKAA2P54646 552 aa4.08□□□□□ -1.76
CCDC66-221ENST00000487739 ARSFP54793 590 aa4.08□□□□□ -1.76
CCDC66-221ENST00000487739 ZNF484Q5JVG2 852 aa4.08□□□□□ -1.76
CCDC66-221ENST00000487739 ZNF449Q6P9G9 518 aa4.08□□□□□ -1.76
CCDC66-221ENST00000487739 SFTPA2Q8IWL1 248 aa4.08□□□□□ -1.76
CCDC66-221ENST00000487739 OTULINQ96BN8 352 aa4.08□□□□□ -1.76
CCDC66-221ENST00000487739 LTV1Q96GA3 475 aaPredicted RBP4.08□□□□□ -1.76
CCDC66-221ENST00000487739 HDAC6Q9UBN7 1215 aa4.08□□□□□ -1.76
CCDC66-221ENST00000487739 CNPY2Q9Y2B0 182 aa4.08□□□□□ -1.76
CCDC66-221ENST00000487739 XPNPEP2O43895 674 aa4.07□□□□□ -1.76
CCDC66-221ENST00000487739 ADAP00813 363 aa4.07□□□□□ -1.76
CCDC66-221ENST00000487739 TFPIP10646 304 aa4.07□□□□□ -1.76
CCDC66-221ENST00000487739 CEP85LQ5SZL2 805 aa4.07□□□□□ -1.76
CCDC66-221ENST00000487739 ADAM5Q6NVV9 412 aa4.07□□□□□ -1.76
CCDC66-221ENST00000487739 GDPD4Q6W3E5 623 aa4.07□□□□□ -1.76
CCDC66-221ENST00000487739 MYLK4Q86YV6 388 aaPredicted RBP4.07□□□□□ -1.76
CCDC66-221ENST00000487739 DNAAF1Q8NEP3 725 aa4.07□□□□□ -1.76
CCDC66-221ENST00000487739 LINS1Q8NG48 757 aa4.07□□□□□ -1.76
CCDC66-221ENST00000487739 CSGALNACT1Q8TDX6 532 aa4.07□□□□□ -1.76
CCDC66-221ENST00000487739 RBM17Q96I25 401 aaKnown RBP4.07□□□□□ -1.76
CCDC66-221ENST00000487739 YME1L1Q96TA2 773 aa4.07□□□□□ -1.76
CCDC66-221ENST00000487739 MMP28Q9H239 520 aa4.07□□□□□ -1.76
CCDC66-221ENST00000487739 TTC12Q9H892 705 aaPredicted RBP4.07□□□□□ -1.76
CCDC66-221ENST00000487739 EBF2Q9HAK2 575 aa4.07□□□□□ -1.76
CCDC66-221ENST00000487739 SAYSD1Q9NPB0 183 aa4.07□□□□□ -1.76
CCDC66-221ENST00000487739 SMARCAL1Q9NZC9 954 aa4.07□□□□□ -1.76
CCDC66-221ENST00000487739 SRP68Q9UHB9 627 aaKnown RBP4.07□□□□□ -1.76
CCDC66-221ENST00000487739 hDV102S1A0JD36 115 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 HNRNPCL2B2RXH8 293 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 TTKP33981 857 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 LIFRP42702 1097 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 HTR3AP46098 478 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 NLRP5P59047 1200 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 CHAF1AQ13111 956 aaPredicted RBP4.06□□□□□ -1.76
CCDC66-221ENST00000487739 TIGD6Q17RP2 521 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 MAP9Q49MG5 647 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 CCDC38Q502W7 563 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 SH2D4BQ5SQS7 431 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 FOXL2NBQ6ZUU3 175 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 SHFQ7M4L6 423 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 MAB21L3Q8N8X9 362 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 ARRDC2Q8TBH0 407 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 TMEM170AQ8WVE7 144 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 RUBCNQ92622 972 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 MASTLQ96GX5 879 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 ZNF700Q9H0M5 742 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 ZNF224Q9NZL3 707 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 CD207Q9UJ71 328 aa4.06□□□□□ -1.76
CCDC66-221ENST00000487739 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.05□□□□□ -1.76
CCDC66-221ENST00000487739 CPED1A4D0V7 1026 aa4.05□□□□□ -1.76
CCDC66-221ENST00000487739 EBAG9O00559 213 aa4.05□□□□□ -1.76
CCDC66-221ENST00000487739 KDM4BO94953 1096 aa4.05□□□□□ -1.76
CCDC66-221ENST00000487739 HNF1BP35680 557 aa4.05□□□□□ -1.76
CCDC66-221ENST00000487739 GLIPR1P48060 266 aa4.05□□□□□ -1.76
CCDC66-221ENST00000487739 HDAC4P56524 1084 aa4.05□□□□□ -1.76
CCDC66-221ENST00000487739 TNFAIP1Q13829 316 aa4.05□□□□□ -1.76
CCDC66-221ENST00000487739 CCDC6Q16204 474 aa4.05□□□□□ -1.76
CCDC66-221ENST00000487739 ACCSLQ4AC99 568 aa4.05□□□□□ -1.76
CCDC66-221ENST00000487739 THAP4Q8WY91 577 aa4.05□□□□□ -1.76
CCDC66-221ENST00000487739 HSPH1Q92598 858 aa4.05□□□□□ -1.76
CCDC66-221ENST00000487739 SDCCAG3Q96C92 435 aa4.05□□□□□ -1.76
CCDC66-221ENST00000487739 RNFT2Q96EX2 444 aa4.05□□□□□ -1.76
CCDC66-221ENST00000487739 TLR8Q9NR97 1041 aaKnown RBP4.05□□□□□ -1.76
CCDC66-221ENST00000487739 SLCO3A1Q9UIG8 710 aa4.05□□□□□ -1.76
CCDC66-221ENST00000487739 SNX9Q9Y5X1 595 aa4.05□□□□□ -1.76
CCDC66-221ENST00000487739 FAM172BPA6NC97 362 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 IPO5O00410 1097 aaKnown RBP4.04□□□□□ -1.76
CCDC66-221ENST00000487739 WNT9BO14905 357 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 TIPRLO75663 272 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 CLDN14O95500 239 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 CD72P21854 359 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 AARSP49588 968 aaKnown RBP eCLIP4.04□□□□□ -1.76
CCDC66-221ENST00000487739 PHEXP78562 749 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 RBBP5Q15291 538 aaKnown RBP4.04□□□□□ -1.76
CCDC66-221ENST00000487739 FBXO43Q4G163 708 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 CBWD5Q5RIA9 395 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 DENND1BQ6P3S1 775 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 C1orf228Q6PIY5 440 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 TRMT1LQ7Z2T5 733 aaKnown RBP4.04□□□□□ -1.76
CCDC66-221ENST00000487739 CHD1LQ86WJ1 897 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 TWSG1Q9GZX9 223 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 CHODLQ9H9P2 273 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 GRHPRQ9UBQ7 328 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 NDRG3Q9UGV2 375 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 SIX4Q9UIU6 781 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 VDAC3Q9Y277 283 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 ADAM18Q9Y3Q7 739 aa4.04□□□□□ -1.76
CCDC66-221ENST00000487739 TYW5A2RUC4 315 aaKnown RBP4.03□□□□□ -1.76
CCDC66-221ENST00000487739 F5H423 210 aaPredicted RBP4.03□□□□□ -1.76
CCDC66-221ENST00000487739 HSPA12AO43301 675 aa4.03□□□□□ -1.76
CCDC66-221ENST00000487739 ATP2C2O75185 946 aa4.03□□□□□ -1.76
CCDC66-221ENST00000487739 CRYAAP02489 173 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms