RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 SYTL3Q4VX76 610 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 ATG9BQ674R7 924 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 FAM180BQ6P0A1 224 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 TBC1D26Q86UD7 250 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 GPAT4Q86UL3 456 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 DIS3L2Q8IYB7 885 aaKnown RBP3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 RASSF8Q8NHQ8 419 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 TMEM174Q8WUU8 243 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 SLC35F5Q8WV83 523 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 ATOH1Q92858 354 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 EME1Q96AY2 570 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 KLHL15Q96M94 604 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 BBS4Q96RK4 519 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 ZPBPQ9BS86 351 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 B3GNT4Q9C0J1 378 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 CATSPERBQ9H7T0 1116 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 PRKRIP1Q9H875 184 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 IL21RQ9HBE5 538 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 SPAG4Q9NPE6 437 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 SNTG1Q9NSN8 517 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 MSRB1Q9NZV6 116 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 ORC3Q9UBD5 711 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 AASSQ9UDR5 926 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 PAM16Q9Y3D7 125 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 SRPRBQ9Y5M8 271 aaKnown RBP3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 A0A087X0M5 115 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 A0A1B0GX30 115 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 PABPN1LA6NDY0 278 aaKnown RBP3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 C4orf47A7E2U8 309 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 EBAG9O00559 213 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 SCGB1D1O95968 90 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 CD4P01730 458 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 URODP06132 367 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 SPARCP09486 303 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 KRT10P13645 584 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 BSGP35613 385 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 AVPR1AP37288 418 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 HARS2P49590 506 aaKnown RBP3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 CDH12P55289 794 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 HDAC4P56524 1084 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 RPL7AP62424 266 aaKnown RBP3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 PTP4A2Q12974 167 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 ITGADQ13349 1161 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 PDE1CQ14123 709 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 GSTA3Q16772 222 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 NAPEPLDQ6IQ20 393 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 CPLX2Q6PUV4 134 aaKnown RBP3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 C17orf99Q6UX52 265 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 PATL1Q86TB9 770 aaKnown RBP3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 LURAP1LQ8IV03 231 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 DENND6AQ8IWF6 608 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 CCDC105Q8IYK2 499 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 MMP21Q8N119 569 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 TDRD7Q8NHU6 1098 aaKnown RBP3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 FAM149B1Q96BN6 582 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 GFM1Q96RP9 751 aaKnown RBP3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 SIN3AQ96ST3 1273 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 CDT1Q9H211 546 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 TTYH1Q9H313 450 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 CXorf56Q9H5V9 222 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 KRCC1Q9NPI7 259 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 SEMA4BQ9NPR2 832 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 HDAC6Q9UBN7 1215 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 FBXO2Q9UK22 296 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 PNMA2Q9UL42 364 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 COG5Q9UP83 839 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 FAM96BQ9Y3D0 163 aa3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 TTBK1Q5TCY1 1321 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P36-201ENST00000487709 TDRD9Q8NDG6 1382 aaKnown RBP3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 IGLV5-39A0A0G2JS06 123 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 TARSL2A2RTX5 802 aaKnown RBP3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 DDTLA6NHG4 134 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 C17orf100A8MU93 164 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 SLC25A17O43808 307 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 ZBED4O75132 1171 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 ATP2C2O75185 946 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 TACC1O75410 805 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 IFNA2P01563 188 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 CHRNB1P11230 501 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 CD58P19256 250 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 CD72P21854 359 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 EPHA8P29322 1005 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 CDC25AP30304 524 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 TNFSF8P32971 234 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 CPOXP36551 454 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 CENPAP49450 140 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 TMPRSS3P57727 454 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 CYP4A11Q02928 519 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 PTGR1Q14914 329 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 CCNG2Q16589 344 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 TSTQ16762 297 aaKnown RBP3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 PLEKHO1Q53GL0 409 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 ZNF667Q5HYK9 610 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 HYIQ5T013 277 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 OTUD1Q5VV17 481 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 TBC1D9BQ66K14 1250 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 CES5AQ6NT32 575 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 KLHL24Q6TFL4 600 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 PARM1Q6UWI2 310 aa3.94□□□□□ -1.78
HMGB1P36-201ENST00000487709 TMTC3Q6ZXV5 915 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms