RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 FAM131CQ96AQ9 280 aa19.78■□□□□ 0.76
SEC22A-208ENST00000487572 AGAP3Q96P47 875 aa19.78■□□□□ 0.76
SEC22A-208ENST00000487572 IL12RB2Q99665 862 aa19.78■□□□□ 0.76
SEC22A-208ENST00000487572 ARRDC1-AS1Q9H2J1 176 aa19.78■□□□□ 0.76
SEC22A-208ENST00000487572 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.77■□□□□ 0.76
SEC22A-208ENST00000487572 METTL12A8MUP2 240 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 HACD1B0YJ81 288 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 EPN2O95208 641 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 RETP07949 1114 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 XPAP23025 273 aaPredicted RBP19.77■□□□□ 0.76
SEC22A-208ENST00000487572 CXCR5P32302 372 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 ABL2P42684 1182 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 TAS2R38P59533 333 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 CCDC6Q16204 474 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 SLC45A4Q5BKX6 768 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 KIAA0895LQ68EN5 471 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 TTC7BQ86TV6 843 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 PDCD6IPQ8WUM4 868 aaKnown RBP19.77■□□□□ 0.76
SEC22A-208ENST00000487572 PIGKQ92643 395 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 LOXL4Q96JB6 756 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 ZNF641Q96N77 438 aaPredicted RBP19.77■□□□□ 0.76
SEC22A-208ENST00000487572 CARD9Q9H257 536 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 AMACRQ9UHK6 382 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 JRKLQ9Y4A0 524 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 PCDHGC4Q9Y5F7 938 aa19.77■□□□□ 0.76
SEC22A-208ENST00000487572 ABCA7Q8IZY2 2146 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 THADAQ6YHU6 1953 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 GFRA3O60609 400 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 PCDH8O95206 1070 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 MSNP26038 577 aaKnown RBP19.76■□□□□ 0.75
SEC22A-208ENST00000487572 PTPN3P26045 913 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 MAOBP27338 520 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 PLA2G5P39877 138 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 PPP2CBP62714 309 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 PPP2CAP67775 309 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 KLF1Q13351 362 aaPredicted RBP19.76■□□□□ 0.75
SEC22A-208ENST00000487572 XRCC4Q13426 336 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 WDR45BQ5MNZ6 344 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 SYCP2LQ5T4T6 812 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 DARS2Q6PI48 645 aaKnown RBP19.76■□□□□ 0.75
SEC22A-208ENST00000487572 SLC13A5Q86YT5 568 aaPredicted RBP19.76■□□□□ 0.75
SEC22A-208ENST00000487572 CDKL3Q8IVW4 592 aaPredicted RBP19.76■□□□□ 0.75
SEC22A-208ENST00000487572 DCLK2Q8N568 766 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 CNTD1Q8N815 330 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 HTR3CQ8WXA8 447 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 BIRC7Q96CA5 298 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 MIR1-1HGQ9H1L0 117 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 PCED1AQ9H1Q7 454 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 DKK3Q9UBP4 350 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 ITM2BQ9Y287 266 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 R3HDM2Q9Y2K5 976 aaKnown RBP19.76■□□□□ 0.75
SEC22A-208ENST00000487572 ATP8A1Q9Y2Q0 1164 aa19.76■□□□□ 0.75
SEC22A-208ENST00000487572 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.76■□□□□ 0.75
SEC22A-208ENST00000487572 BCLAF3A2AJT9 711 aaKnown RBP19.75■□□□□ 0.75
SEC22A-208ENST00000487572 NEMP1O14524 444 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 CEP104O60308 925 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 RNGTTO60942 597 aaKnown RBP19.75■□□□□ 0.75
SEC22A-208ENST00000487572 IGHV4-34P06331 123 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 RBP3P10745 1247 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 TIMP2P16035 220 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 RBL1P28749 1068 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 MAT2AP31153 395 aaKnown RBP19.75■□□□□ 0.75
SEC22A-208ENST00000487572 NIPAL4Q0D2K0 466 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 TRAF2Q12933 501 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 RALGPS1Q5JS13 557 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 BRAT1Q6PJG6 821 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 ZSWIM9Q86XI8 627 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 C17orf53Q8N3J3 647 aaPredicted RBP19.75■□□□□ 0.75
SEC22A-208ENST00000487572 TTC13Q8NBP0 860 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 RUBCNQ92622 972 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 KDM4CQ9H3R0 1056 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 PREBQ9HCU5 417 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 EIF2B4Q9UI10 523 aaKnown RBP19.75■□□□□ 0.75
SEC22A-208ENST00000487572 GGT7Q9UJ14 662 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 FADS3Q9Y5Q0 445 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 NUMA1Q14980 2115 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 VPS13AQ96RL7 3174 aa19.75■□□□□ 0.75
SEC22A-208ENST00000487572 MYO15AQ9UKN7 3530 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 TSPAN11A1L157 253 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 UPK3BL1B0FP48 263 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 UPK3BL2E5RIL1 263 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 TRAFD1O14545 582 aaPredicted RBP19.74■□□□□ 0.75
SEC22A-208ENST00000487572 MTSS1O43312 755 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 ATP1A1P05023 1023 aaKnown RBP19.74■□□□□ 0.75
SEC22A-208ENST00000487572 PRKCGP05129 697 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 ITIH2P19823 946 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 MPLP40238 635 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 CD86P42081 329 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 SPEM2Q0P670 501 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 WASHC5Q12768 1159 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 TEX44Q53QW1 395 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 ALG1LQ6GMV1 187 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 SYT12Q8IV01 421 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 ARRDC2Q8TBH0 407 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 ATG4AQ8WYN0 398 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 RAB7BQ96AH8 199 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 SMOC1Q9H4F8 434 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 TMEM74BQ9NUR3 256 aa19.74■□□□□ 0.75
SEC22A-208ENST00000487572 KLHL8Q9P2G9 620 aaPredicted RBP19.74■□□□□ 0.75
SEC22A-208ENST00000487572 RAI2Q9Y5P3 530 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms