RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 PPP1R16AQ96I34 528 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 RBM15Q96T37 977 aaKnown RBP eCLIP11.85□□□□□ -0.518e-6■■□□□ 12.8
TRIM56-204ENST00000487252 TRIM55Q9BYV6 548 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 TRIT1Q9H3H1 467 aaKnown RBP11.85□□□□□ -0.51
TRIM56-204ENST00000487252 CNGB3Q9NQW8 809 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 OCIAD1Q9NX40 245 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 TLR6Q9Y2C9 796 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 FARP1Q9Y4F1 1045 aaPredicted RBP11.85□□□□□ -0.51
TRIM56-204ENST00000487252 PCDHGA9Q9Y5G4 932 aaKnown RBP11.85□□□□□ -0.51
TRIM56-204ENST00000487252 OAS3Q9Y6K5 1087 aaKnown RBP11.85□□□□□ -0.51
TRIM56-204ENST00000487252 WASF2Q9Y6W5 498 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 PKDREJQ9NTG1 2253 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 TSPAN6O43657 245 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 LEFTY1O75610 366 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 RASGRP1O95267 797 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 DLGAP3O95886 979 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 THRAP10827 490 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 CTSEP14091 401 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 TACR2P21452 398 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 CD1CP29017 333 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 PTGER4P35408 488 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 PEX5P50542 639 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 TYRO3Q06418 890 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 SEMA5AQ13591 1074 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 ARHGEF7Q14155 803 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 MAP7Q14244 749 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 ZRSR2Q15696 482 aaKnown RBP11.84□□□□□ -0.51
TRIM56-204ENST00000487252 C17orf82Q86X59 251 aaPredicted RBP11.84□□□□□ -0.51
TRIM56-204ENST00000487252 SLC4A11Q8NBS3 891 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 OR4D9Q8NGE8 314 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 TATDN2Q93075 761 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 RNF34Q969K3 372 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 TSACCQ96A04 125 aaPredicted RBP11.84□□□□□ -0.51
TRIM56-204ENST00000487252 CCDC114Q96M63 670 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 PRMT1Q99873 361 aaKnown RBP11.84□□□□□ -0.51
TRIM56-204ENST00000487252 TNMDQ9H2S6 317 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 LRRC4Q9HBW1 653 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 CCDC39Q9UFE4 941 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 IL36AQ9UHA7 158 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 KCND3Q9UK17 655 aa11.84□□□□□ -0.51
TRIM56-204ENST00000487252 FAM155BO75949 473 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 DNAJB5O75953 348 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 MAP3K6O95382 1288 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 RECKO95980 971 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 FYNP06241 537 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 CD58P19256 250 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 L1CAMP32004 1257 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 PGDP52209 483 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 SLC8A3P57103 927 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 OR1D5P58170 312 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 DLG4P78352 724 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 RAP1GAP2Q684P5 730 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 LINGO4Q6UY18 593 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 NYAP1Q6ZVC0 841 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 TMEM135Q86UB9 458 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 HID1Q8IV36 788 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 LINC00301Q8NCQ3 95 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 GRIN3AQ8TCU5 1115 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 C19orf60Q96EN9 201 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 RANBP9Q96S59 729 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 MFRPQ9BY79 579 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 MBNL1Q9NR56 388 aaKnown RBP11.83□□□□□ -0.52
TRIM56-204ENST00000487252 PDP2Q9P2J9 529 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 PCDHB3Q9Y5E6 796 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 DGKBQ9Y6T7 804 aa11.83□□□□□ -0.52
TRIM56-204ENST00000487252 ZNF469Q96JG9 3925 aaPredicted RBP11.82□□□□□ -0.52
TRIM56-204ENST00000487252 TCAF2A6NFQ2 919 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 K7ERQ8 282 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 SMAD6O43541 496 aaKnown RBP11.82□□□□□ -0.52
TRIM56-204ENST00000487252 PPP6R2O75170 966 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 ZNF821O75541 412 aaPredicted RBP11.82□□□□□ -0.52
TRIM56-204ENST00000487252 HLA-DRAP01903 254 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 CSTF2P33240 577 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRIM56-204ENST00000487252 RAD23BP54727 409 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 MC2RQ01718 297 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 DPYDQ12882 1025 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 ERV3-1Q14264 604 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 TCEA2Q15560 299 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 AMZ1Q400G9 498 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 ZNF394Q53GI3 561 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 C1orf220Q5T0J3 134 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 TTC39BQ5VTQ0 682 aaPredicted RBP11.82□□□□□ -0.52
TRIM56-204ENST00000487252 KCTD16Q68DU8 428 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 PARS2Q7L3T8 475 aaKnown RBP11.82□□□□□ -0.52
TRIM56-204ENST00000487252 CIR1Q86X95 450 aaPredicted RBP11.82□□□□□ -0.52
TRIM56-204ENST00000487252 CCDC65Q8IXS2 484 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 TP53I13Q8NBR0 393 aaPredicted RBP11.82□□□□□ -0.52
TRIM56-204ENST00000487252 SPDYE1Q8NFV5 336 aaPredicted RBP11.82□□□□□ -0.52
TRIM56-204ENST00000487252 IRGQQ8WZA9 623 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 ZPBPQ9BS86 351 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 DNAI2Q9GZS0 605 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 NIF3L1Q9GZT8 377 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 GOLPH3LQ9H4A5 285 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 MRPL40Q9NQ50 206 aaKnown RBP11.82□□□□□ -0.52
TRIM56-204ENST00000487252 CGNQ9P2M7 1197 aaKnown RBP11.82□□□□□ -0.52
TRIM56-204ENST00000487252 PCDHA7Q9UN72 937 aa11.82□□□□□ -0.52
TRIM56-204ENST00000487252 CHD5Q8TDI0 1954 aa11.81□□□□□ -0.52
TRIM56-204ENST00000487252 ANKUB1A6NFN9 424 aa11.81□□□□□ -0.52
TRIM56-204ENST00000487252 TMEM110-MUSTN1A8MSY1 372 aa11.81□□□□□ -0.52
TRIM56-204ENST00000487252 IKBKBO14920 756 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms