RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 CEP63Q96MT8 703 aa15.12■□□□□ 0.01
PFDN4-204ENST00000487129 INTS2Q9H0H0 1204 aaKnown RBP15.12■□□□□ 0.01
PFDN4-204ENST00000487129 SEPT10Q9P0V9 454 aa15.12■□□□□ 0.01
PFDN4-204ENST00000487129 HECAQ9UBI9 543 aaPredicted RBP15.12■□□□□ 0.01
PFDN4-204ENST00000487129 MAN2B2Q9Y2E5 1009 aa15.12■□□□□ 0.01
PFDN4-204ENST00000487129 DOCK4Q8N1I0 1966 aa15.12■□□□□ 0.01
PFDN4-204ENST00000487129 SPENQ96T58 3664 aaKnown RBP15.12■□□□□ 0.01
PFDN4-204ENST00000487129 A0A1W2PQC6 194 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 AGRPO00253 132 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 CD44P16070 742 aaKnown RBP15.11■□□□□ 0.01
PFDN4-204ENST00000487129 ITIH2P19823 946 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 DNA2P51530 1060 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 SLC20A2Q08357 652 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 BECN1Q14457 450 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 IGFBP7Q16270 282 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 PTPN20Q4JDL3 420 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 TTI2Q6NXR4 508 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 C11orf57Q6ZUT1 292 aaPredicted RBP15.11■□□□□ 0.01
PFDN4-204ENST00000487129 CCNJLQ8IV13 435 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 PASD1Q8IV76 773 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 TRIM59Q8IWR1 403 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 ISG20Q96AZ6 181 aaKnown RBP15.11■□□□□ 0.01
PFDN4-204ENST00000487129 PGAP3Q96FM1 320 aaPredicted RBP15.11■□□□□ 0.01
PFDN4-204ENST00000487129 C1orf74Q96LT6 269 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 GSDMAQ96QA5 445 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 EPAS1Q99814 870 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 SPON2Q9BUD6 331 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 GTPBP4Q9BZE4 634 aaKnown RBP15.11■□□□□ 0.01
PFDN4-204ENST00000487129 EDEM3Q9BZQ6 932 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 ADNPQ9H2P0 1102 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 WDCPQ9H6R7 721 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 ATP13A1Q9HD20 1204 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 RMND1Q9NWS8 449 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 APPL1Q9UKG1 709 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 SDK2Q58EX2 2172 aa15.11■□□□□ 0.01
PFDN4-204ENST00000487129 NEMP1O14524 444 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 TOR1BO14657 336 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 MMP20O60882 483 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 SLC6A3Q01959 620 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 GNA12Q03113 381 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 IRF4Q15306 451 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 ELOCQ15369 112 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 CERCAMQ5T4B2 595 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 GJB7Q6PEY0 223 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 BNIPLQ7Z465 357 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 C1orf131Q8NDD1 294 aaKnown RBP15.1■□□□□ 0.01
PFDN4-204ENST00000487129 TSACCQ96A04 125 aaPredicted RBP15.1■□□□□ 0.01
PFDN4-204ENST00000487129 TMEM159Q96B96 161 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 SCAND2PQ9GZW5 306 aaPredicted RBP15.1■□□□□ 0.01
PFDN4-204ENST00000487129 UBE2TQ9NPD8 197 aaPredicted RBP15.1■□□□□ 0.01
PFDN4-204ENST00000487129 SEPT3Q9UH03 358 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 PCDHGC3Q9UN70 934 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 GPR34Q9UPC5 381 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 RNF215Q9Y6U7 377 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 ZFC3H1O60293 1989 aaKnown RBP15.1■□□□□ 0.01
PFDN4-204ENST00000487129 UNC13CQ8NB66 2214 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 LRRK1Q38SD2 2015 aa15.1■□□□□ 0.01
PFDN4-204ENST00000487129 CHD5Q8TDI0 1954 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 CXorf51AA0A1B0GTR3 108 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 UGT2B4P06133 528 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 ALPIP09923 528 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 ACVRL1P37023 503 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 CASRP41180 1078 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 CETN1Q12798 172 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 C16orf72Q14CZ0 275 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 KLHL40Q2TBA0 621 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 WSCD2Q2TBF2 565 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 CCDC40Q4G0X9 1142 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 TRNP1Q6NT89 227 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 OGFOD3Q6PK18 319 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 SPRED1Q7Z699 444 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 HID1Q8IV36 788 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 FMR1NBQ8N0W7 255 aaPredicted RBP15.09■□□□□ 0.01
PFDN4-204ENST00000487129 ZSCAN1Q8NBB4 408 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 OR2AP1Q8NGE2 309 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 PMEPA1Q969W9 287 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 KLHL32Q96NJ5 620 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 RBM15Q96T37 977 aaKnown RBP eCLIP15.09■□□□□ 0.013e-10■□□□□ 10.7
PFDN4-204ENST00000487129 TBCBQ99426 244 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 B3GNT4Q9C0J1 378 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 NDFIP2Q9NV92 336 aa15.09■□□□□ 0.01
PFDN4-204ENST00000487129 TM7SF2O76062 418 aa15.08■□□□□ 0
PFDN4-204ENST00000487129 CCL4P13236 92 aa15.08■□□□□ 0
PFDN4-204ENST00000487129 CD82P27701 267 aa15.08■□□□□ 0
PFDN4-204ENST00000487129 PEX5P50542 639 aa15.08■□□□□ 0
PFDN4-204ENST00000487129 BLKP51451 505 aa15.08■□□□□ 0
PFDN4-204ENST00000487129 MAPK10P53779 464 aa15.08■□□□□ 0
PFDN4-204ENST00000487129 POLE2P56282 527 aa15.08■□□□□ 0
PFDN4-204ENST00000487129 APBA1Q02410 837 aa15.08■□□□□ 0
PFDN4-204ENST00000487129 KCNAB2Q13303 367 aa15.08■□□□□ 0
PFDN4-204ENST00000487129 Q8N9G6 341 aaPredicted RBP15.08■□□□□ 0
PFDN4-204ENST00000487129 OR6C4Q8NGE1 309 aa15.08■□□□□ 0
PFDN4-204ENST00000487129 SCG3Q8WXD2 468 aaKnown RBP15.08■□□□□ 0
PFDN4-204ENST00000487129 JPH3Q8WXH2 748 aaPredicted RBP15.08■□□□□ 0
PFDN4-204ENST00000487129 ARHGEF2Q92974 986 aaKnown RBP15.08■□□□□ 0
PFDN4-204ENST00000487129 FUBP1Q96AE4 644 aaKnown RBP15.08■□□□□ 0
PFDN4-204ENST00000487129 ARHGEF26Q96DR7 871 aa15.08■□□□□ 0
PFDN4-204ENST00000487129 CMKLR1Q99788 373 aa15.08■□□□□ 0
PFDN4-204ENST00000487129 SEMA6CQ9H3T2 930 aa15.08■□□□□ 0
PFDN4-204ENST00000487129 RRN3Q9NYV6 651 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms