RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 CFAP45Q9UL16 551 aa7.76□□□□□ -1.17
PDPN-205ENST00000487038 PLAAQ9Y263 795 aa7.76□□□□□ -1.17
PDPN-205ENST00000487038 PCDHGA3Q9Y5H0 932 aa7.76□□□□□ -1.17
PDPN-205ENST00000487038 OTOGQ6ZRI0 2925 aa7.76□□□□□ -1.17
PDPN-205ENST00000487038 CACNA1DQ01668 2161 aa7.76□□□□□ -1.17
PDPN-205ENST00000487038 CSMD1Q96PZ7 3565 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 CXorf51AA0A1B0GTR3 108 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 PRR19A6NJB7 356 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 RNF103O00237 685 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 NUDT21O43809 227 aaKnown RBP7.75□□□□□ -1.17
PDPN-205ENST00000487038 PAGE1O75459 146 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 TNFP01375 233 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 MAN1A1P33908 653 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 UGT1A3P35503 534 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 ETFBP38117 255 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 GGCXP38435 758 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 ABL2P42684 1182 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 NOP2P46087 812 aaKnown RBP7.75□□□□□ -1.17
PDPN-205ENST00000487038 COPB1P53618 953 aaKnown RBP7.75□□□□□ -1.17
PDPN-205ENST00000487038 GEMIN4P57678 1058 aaKnown RBP7.75□□□□□ -1.17
PDPN-205ENST00000487038 RAB15P59190 212 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 PITX1P78337 314 aaPredicted RBP7.75□□□□□ -1.17
PDPN-205ENST00000487038 MC1RQ01726 317 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 GCNT1Q02742 428 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 CDC20Q12834 499 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 NFATC4Q14934 902 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 C16orf72Q14CZ0 275 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 POLD3Q15054 466 aaPredicted RBP7.75□□□□□ -1.17
PDPN-205ENST00000487038 TCEA2Q15560 299 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 C14orf28Q4W4Y0 310 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 ZNF805Q5CZA5 627 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 EFHC2Q5JST6 749 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 BRMS1LQ5PSV4 323 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 CERCAMQ5T4B2 595 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 ATL3Q6DD88 541 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 ENPP7Q6UWV6 458 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 TMEM110Q86TL2 294 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 HEATR4Q86WZ0 1026 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 DEFB106AQ8N104 65 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 EFCAB3Q8N7B9 438 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 TP53I13Q8NBR0 393 aaPredicted RBP7.75□□□□□ -1.17
PDPN-205ENST00000487038 GPR156Q8NFN8 814 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 KIAA1524Q8TCG1 905 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 APOBEC4Q8WW27 367 aaKnown RBP7.75□□□□□ -1.17
PDPN-205ENST00000487038 CCDC34Q96HJ3 373 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 SLC45A3Q96JT2 553 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 SLC2A13Q96QE2 648 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 DDA1Q9BW61 102 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 SLC4A5Q9BY07 1137 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 ASPSCR1Q9BZE9 553 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 ZMYND15Q9H091 742 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 INTS2Q9H0H0 1204 aaKnown RBP7.75□□□□□ -1.17
PDPN-205ENST00000487038 SIK2Q9H0K1 926 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 GPN2Q9H9Y4 310 aaPredicted RBP7.75□□□□□ -1.17
PDPN-205ENST00000487038 ATP13A1Q9HD20 1204 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 TMEM51Q9NW97 253 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 RRN3Q9NYV6 651 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 LRIT1Q9P2V4 623 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 ARMCX3Q9UH62 379 aaPredicted RBP7.75□□□□□ -1.17
PDPN-205ENST00000487038 PNMA8BQ9ULN7 279 aaPredicted RBP7.75□□□□□ -1.17
PDPN-205ENST00000487038 ITM2BQ9Y287 266 aa7.75□□□□□ -1.17
PDPN-205ENST00000487038 F8P00451 2351 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 NF1P21359 2839 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 A0A0D9SEW6 157 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 ILVBLA1L0T0 632 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 EFCAB7A8K855 629 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 B4DGG1 531 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 RNF225M0QZC1 329 aaPredicted RBP7.74□□□□□ -1.17
PDPN-205ENST00000487038 KRIT1O00522 736 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 MTSS1O43312 755 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 RAD1O60671 282 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 ZNF821O75541 412 aaPredicted RBP7.74□□□□□ -1.17
PDPN-205ENST00000487038 UGT2B4P06133 528 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 KRT5P13647 590 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 PFKFB1P16118 471 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 XPAP23025 273 aaPredicted RBP7.74□□□□□ -1.17
PDPN-205ENST00000487038 KELP23276 732 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 CSTF2P33240 577 aaKnown RBP eCLIP7.74□□□□□ -1.17
PDPN-205ENST00000487038 FMO5P49326 533 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 RIPPLY3P57055 190 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 SNX16P57768 344 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 SRP54P61011 504 aaKnown RBP7.74□□□□□ -1.17
PDPN-205ENST00000487038 SNRPD1P62314 119 aaKnown RBP7.74□□□□□ -1.17
PDPN-205ENST00000487038 FKBP3Q00688 224 aaKnown RBP7.74□□□□□ -1.17
PDPN-205ENST00000487038 RAD51Q06609 339 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 C1QBPQ07021 282 aaKnown RBP7.74□□□□□ -1.17
PDPN-205ENST00000487038 ELP6Q0PNE2 266 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 PDCLQ13371 301 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 BIRC2Q13490 618 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 TRA2AQ13595 282 aaKnown RBP eCLIP7.74□□□□□ -1.17
PDPN-205ENST00000487038 HLTFQ14527 1009 aaKnown RBP eCLIP7.74□□□□□ -1.17
PDPN-205ENST00000487038 LRRC14Q15048 493 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 IRF4Q15306 451 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 ALG11Q2TAA5 492 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 KLHL40Q2TBA0 621 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 ALFQ53S48 1182 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 ERICH6BQ5W0A0 696 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 HIST2H2BCQ6DN03 193 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 TFAP2DQ7Z6R9 452 aa7.74□□□□□ -1.17
PDPN-205ENST00000487038 TAF8Q7Z7C8 310 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms