RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 EIF2B4Q9UI10 523 aaKnown RBP13.32□□□□□ -0.28
SF1-216ENST00000486867 SLC6A14Q9UN76 642 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 DMTF1Q9Y222 760 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.32□□□□□ -0.28
SF1-216ENST00000486867 ATXN2Q99700 1313 aaKnown RBP13.32□□□□□ -0.28
SF1-216ENST00000486867 LRP4O75096 1905 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 MIF4GDA9UHW6 222 aaKnown RBP13.31□□□□□ -0.28
SF1-216ENST00000486867 TGM2P21980 687 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 ABL2P42684 1182 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 MMP13P45452 471 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 GRIA4P48058 902 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 RACK1P63244 317 aaKnown RBP13.31□□□□□ -0.28
SF1-216ENST00000486867 IFI35P80217 286 aaPredicted RBP13.31□□□□□ -0.28
SF1-216ENST00000486867 ADCY2Q08462 1091 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 ZNF235Q14590 738 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 ZNF284Q2VY69 593 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 ZFYVE27Q5T4F4 411 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 MARC1Q5VT66 337 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 BRAT1Q6PJG6 821 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 BBS12Q6ZW61 710 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 HORMAD1Q86X24 394 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 RYBPQ8N488 228 aaPredicted RBP13.31□□□□□ -0.28
SF1-216ENST00000486867 ASB12Q8WXK4 309 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 ALG3Q92685 438 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 IL12RB2Q99665 862 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 ZDHHC5Q9C0B5 715 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 SUV39H2Q9H5I1 410 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 ATP13A3Q9H7F0 1226 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 TM9SF3Q9HD45 589 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 RXFP3Q9NSD7 469 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 DLL3Q9NYJ7 618 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 ZFR2Q9UPR6 939 aaKnown RBP13.31□□□□□ -0.28
SF1-216ENST00000486867 CAPN6Q9Y6Q1 641 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 SCN8AQ9UQD0 1980 aa13.31□□□□□ -0.28
SF1-216ENST00000486867 TBC1D3DA0A087WVF3 549 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 TBC1D3IA0A087WXS9 549 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 TBC1D3EA0A087X179 549 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 TBC1D3KA0A087X1G2 549 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.3□□□□□ -0.28
SF1-216ENST00000486867 A0A1W2PR77 199 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 MACROD2A1Z1Q3 448 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 TBC1D3FA6NER0 549 aaPredicted RBP13.3□□□□□ -0.28
SF1-216ENST00000486867 TBC1D3LB9A6J9 549 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 CDX4O14627 284 aaPredicted RBP13.3□□□□□ -0.28
SF1-216ENST00000486867 TM4SF5O14894 197 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 TSPAN6O43657 245 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 KRT86O43790 486 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 RNGTTO60942 597 aaKnown RBP13.3□□□□□ -0.28
SF1-216ENST00000486867 SOCS5O75159 536 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 FSBPO95073 299 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 CCDC175P0C221 793 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 TBC1D3HP0C7X1 549 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 CCNB1P14635 433 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 TIMP2P16035 220 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 CES1P23141 567 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 AFF3P51826 1226 aaKnown RBP13.3□□□□□ -0.28
SF1-216ENST00000486867 BNC1Q01954 994 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 PDK1Q15118 436 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 TBC1D3GQ6DHY5 549 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 TBC1D3CQ6IPX1 549 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 KIAA1161Q6NSJ0 714 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 FBXL19Q6PCT2 694 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 BZW1Q7L1Q6 419 aaKnown RBP13.3□□□□□ -0.28
SF1-216ENST00000486867 ZSWIM9Q86XI8 627 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 RFX6Q8HWS3 928 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 CAMK1DQ8IU85 385 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 CCDC13Q8IYE1 715 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 RGL4Q8IZJ4 473 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 TBC1D3Q8IZP1 549 aaPredicted RBP13.3□□□□□ -0.28
SF1-216ENST00000486867 BBS5Q8N3I7 341 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 ZCCHC9Q8N567 271 aaKnown RBP13.3□□□□□ -0.28
SF1-216ENST00000486867 C12orf50Q8NA57 414 aaPredicted RBP13.3□□□□□ -0.28
SF1-216ENST00000486867 TMEM145Q8NBT3 493 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 NETO1Q8TDF5 533 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.3□□□□□ -0.28
SF1-216ENST00000486867 NSMCE1Q8WV22 266 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 HES6Q96HZ4 224 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 C1QTNF2Q9BXJ5 285 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 NUSAP1Q9BXS6 441 aaKnown RBP13.3□□□□□ -0.28
SF1-216ENST00000486867 MAK16Q9BXY0 300 aaKnown RBP13.3□□□□□ -0.28
SF1-216ENST00000486867 AMFRQ9UKV5 643 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 ATP8A1Q9Y2Q0 1164 aa13.3□□□□□ -0.28
SF1-216ENST00000486867 A0A1W2PQ67 120 aa13.29□□□□□ -0.28
SF1-216ENST00000486867 FAM47DPA6NHR8 397 aa13.29□□□□□ -0.28
SF1-216ENST00000486867 UPK3BL1B0FP48 263 aa13.29□□□□□ -0.28
SF1-216ENST00000486867 UPK3BL2E5RIL1 263 aa13.29□□□□□ -0.28
SF1-216ENST00000486867 ARHGAP33O14559 1287 aa13.29□□□□□ -0.28
SF1-216ENST00000486867 SLC30A4O14863 429 aa13.29□□□□□ -0.28
SF1-216ENST00000486867 VILLO15195 856 aa13.29□□□□□ -0.28
SF1-216ENST00000486867 DDX3YO15523 660 aaKnown RBP13.29□□□□□ -0.28
SF1-216ENST00000486867 GDF9O60383 454 aa13.29□□□□□ -0.28
SF1-216ENST00000486867 CST8O60676 142 aa13.29□□□□□ -0.28
SF1-216ENST00000486867 GJB3O75712 270 aa13.29□□□□□ -0.28
SF1-216ENST00000486867 MAP3K6O95382 1288 aa13.29□□□□□ -0.28
SF1-216ENST00000486867 PIGNO95427 931 aa13.29□□□□□ -0.28
SF1-216ENST00000486867 KRT10P13645 584 aa13.29□□□□□ -0.28
SF1-216ENST00000486867 TNNT1P13805 278 aa13.29□□□□□ -0.28
SF1-216ENST00000486867 ENGP17813 658 aa13.29□□□□□ -0.28
SF1-216ENST00000486867 SDHBP21912 280 aa13.29□□□□□ -0.28
SF1-216ENST00000486867 SERPINA4P29622 427 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms