RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 KLRC4O43908 158 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 DIAPH2O60879 1101 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 RASGRP1O95267 797 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 TRUB2O95900 331 aaKnown RBP15.4■□□□□ 0.06
U2AF1-211ENST00000486519 CCNHP51946 323 aaPredicted RBP15.4■□□□□ 0.06
U2AF1-211ENST00000486519 SRP54P61011 504 aaKnown RBP15.4■□□□□ 0.06
U2AF1-211ENST00000486519 AUHQ13825 339 aaKnown RBP15.4■□□□□ 0.06
U2AF1-211ENST00000486519 ARHGEF7Q14155 803 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 ALFQ53S48 1182 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 LCLAT1Q6UWP7 414 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 NLGN4XQ8N0W4 816 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 UBR7Q8N806 425 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 BMPERQ8N8U9 685 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 FAM46DQ8NEK8 389 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 NLGN4YQ8NFZ3 816 aaPredicted RBP15.4■□□□□ 0.06
U2AF1-211ENST00000486519 GOLGA5Q8TBA6 731 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 RTP4Q96DX8 246 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 MOCOSQ96EN8 888 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 CCDC114Q96M63 670 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 USP28Q96RU2 1077 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 RBM15Q96T37 977 aaKnown RBP eCLIP15.4■□□□□ 0.06
U2AF1-211ENST00000486519 TRIM55Q9BYV6 548 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 DNAI2Q9GZS0 605 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 TMEM8AQ9HCN3 771 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 TBC1D30Q9Y2I9 924 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 OR1A2Q9Y585 309 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 SNX10Q9Y5X0 201 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 PRRC2CQ9Y520 2896 aaKnown RBP15.4■□□□□ 0.06
U2AF1-211ENST00000486519 FBN3Q75N90 2809 aa15.39■□□□□ 0.06
U2AF1-211ENST00000486519 DOCK4Q8N1I0 1966 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 SYNJ2BP-COX16A0A087WUM0 186 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 C16orf96A6NNT2 1141 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 M0QYV0 167 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 EIF5BO60841 1220 aaKnown RBP15.39■□□□□ 0.05
U2AF1-211ENST00000486519 BRD2P25440 801 aaKnown RBP15.39■□□□□ 0.05
U2AF1-211ENST00000486519 CD1CP29017 333 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 ALDH4A1P30038 563 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 RABGAP1LQ5R372 815 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 TTC39BQ5VTQ0 682 aaPredicted RBP15.39■□□□□ 0.05
U2AF1-211ENST00000486519 SPECC1LQ69YQ0 1117 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 XYLT1Q86Y38 959 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 NRSN1Q8IZ57 195 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 ATP6V0D2Q8N8Y2 350 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 OR7D4Q8NG98 312 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 OR1E3Q8WZA6 343 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 ZDHHC6Q9H6R6 413 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 CYP4F12Q9HCS2 524 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 APMAPQ9HDC9 416 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 MRPL40Q9NQ50 206 aaKnown RBP15.39■□□□□ 0.05
U2AF1-211ENST00000486519 AKAP7Q9P0M2 348 aaPredicted RBP15.39■□□□□ 0.05
U2AF1-211ENST00000486519 COX16Q9P0S2 106 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 FCF1Q9Y324 198 aaKnown RBP15.39■□□□□ 0.05
U2AF1-211ENST00000486519 HS3ST4Q9Y661 456 aa15.39■□□□□ 0.05
U2AF1-211ENST00000486519 RNF225M0QZC1 329 aaPredicted RBP15.38■□□□□ 0.05
U2AF1-211ENST00000486519 NEMP1O14524 444 aa15.38■□□□□ 0.05
U2AF1-211ENST00000486519 AREL1O15033 823 aa15.38■□□□□ 0.05
U2AF1-211ENST00000486519 VDRP11473 427 aa15.38■□□□□ 0.05
U2AF1-211ENST00000486519 PDIA4P13667 645 aaKnown RBP15.38■□□□□ 0.05
U2AF1-211ENST00000486519 DNA2P51530 1060 aa15.38■□□□□ 0.05
U2AF1-211ENST00000486519 LIMK2P53671 638 aa15.38■□□□□ 0.05
U2AF1-211ENST00000486519 TAF5Q15542 800 aa15.38■□□□□ 0.05
U2AF1-211ENST00000486519 INPP5JQ15735 1006 aaPredicted RBP15.38■□□□□ 0.05
U2AF1-211ENST00000486519 KLHL40Q2TBA0 621 aa15.38■□□□□ 0.05
U2AF1-211ENST00000486519 TAF8Q7Z7C8 310 aa15.38■□□□□ 0.05
U2AF1-211ENST00000486519 FAM129CQ86XR2 697 aa15.38■□□□□ 0.05
U2AF1-211ENST00000486519 FAM186BQ8IYM0 893 aa15.38■□□□□ 0.05
U2AF1-211ENST00000486519 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.38■□□□□ 0.05
U2AF1-211ENST00000486519 KIAA1143Q96AT1 154 aaPredicted RBP15.38■□□□□ 0.05
U2AF1-211ENST00000486519 HEPHQ9BQS7 1158 aa15.38■□□□□ 0.05
U2AF1-211ENST00000486519 WRAP53Q9BUR4 548 aaKnown RBP15.38■□□□□ 0.05
U2AF1-211ENST00000486519 TM6SF2Q9BZW4 377 aa15.38■□□□□ 0.05
U2AF1-211ENST00000486519 LRRC27Q9C0I9 530 aa15.38■□□□□ 0.05
U2AF1-211ENST00000486519 ANLNQ9NQW6 1124 aa15.38■□□□□ 0.05
U2AF1-211ENST00000486519 FRMD4BQ9Y2L6 1034 aa15.38■□□□□ 0.05
U2AF1-211ENST00000486519 KCTD3Q9Y597 815 aa15.38■□□□□ 0.05
U2AF1-211ENST00000486519 MTORP42345 2549 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 I6L893 689 aaPredicted RBP15.37■□□□□ 0.05
U2AF1-211ENST00000486519 NUDT21O43809 227 aaKnown RBP15.37■□□□□ 0.05
U2AF1-211ENST00000486519 RHOCP08134 193 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 THRAP10827 490 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 BLKP51451 505 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 ERV3-1Q14264 604 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 NFATC4Q14934 902 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 SLC39A14Q15043 492 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 WSCD2Q2TBF2 565 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 EDRF1Q3B7T1 1238 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 ARTNQ5T4W7 220 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 Q8NA96 180 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 CCDC150Q8NCX0 1101 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 AGBL5Q8NDL9 886 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 TMEM168Q9H0V1 697 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 RAB20Q9NX57 234 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 RCOR3Q9P2K3 495 aaPredicted RBP15.37■□□□□ 0.05
U2AF1-211ENST00000486519 KLQ9UEF7 1012 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 OAS3Q9Y6K5 1087 aaKnown RBP15.37■□□□□ 0.05
U2AF1-211ENST00000486519 NAV3Q8IVL0 2385 aa15.37■□□□□ 0.05
U2AF1-211ENST00000486519 A0A1B0GTL3 188 aa15.36■□□□□ 0.05
U2AF1-211ENST00000486519 PDXKO00764 312 aa15.36■□□□□ 0.05
U2AF1-211ENST00000486519 KRT86O43790 486 aa15.36■□□□□ 0.05
U2AF1-211ENST00000486519 RFPL1O75677 317 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms