RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 HK3P52790 923 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 THOP1P52888 689 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 DAOAP59103 153 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 SNRPFP62306 86 aaKnown RBP8.39□□□□□ -1.07
XRN1-212ENST00000486211 B4GALNT1Q00973 533 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 MC1RQ01726 317 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 PPARDQ03181 441 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 NAA30Q147X3 362 aaPredicted RBP8.39□□□□□ -1.07
XRN1-212ENST00000486211 ELOCQ15369 112 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 TCEA2Q15560 299 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 INPP5JQ15735 1006 aaPredicted RBP8.39□□□□□ -1.07
XRN1-212ENST00000486211 NADK2Q4G0N4 442 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 C1orf220Q5T0J3 134 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 RRAGBQ5VZM2 374 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 OGFOD3Q6PK18 319 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 CIR1Q86X95 450 aaPredicted RBP8.39□□□□□ -1.07
XRN1-212ENST00000486211 XYLT1Q86Y38 959 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 MCEMP1Q8IX19 187 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 CCDC65Q8IXS2 484 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 CCAR2Q8N163 923 aaKnown RBP8.39□□□□□ -1.07
XRN1-212ENST00000486211 SCML4Q8N228 414 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 SLC4A11Q8NBS3 891 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 ASB12Q8WXK4 309 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 KIAA1143Q96AT1 154 aaPredicted RBP8.39□□□□□ -1.07
XRN1-212ENST00000486211 ZNF837Q96EG3 531 aaPredicted RBP8.39□□□□□ -1.07
XRN1-212ENST00000486211 FEM1CQ96JP0 617 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 IPO9Q96P70 1041 aaKnown RBP8.39□□□□□ -1.07
XRN1-212ENST00000486211 HAPLN3Q96S86 360 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 NUDT22Q9BRQ3 303 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 EDEM3Q9BZQ6 932 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 LRRC4Q9HBW1 653 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 DYRK4Q9NR20 520 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 AKAP7Q9P0M2 348 aaPredicted RBP8.39□□□□□ -1.07
XRN1-212ENST00000486211 SLC25A13Q9UJS0 675 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 DOLKQ9UPQ8 538 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 HS3ST2Q9Y278 367 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 SLC5A6Q9Y289 635 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 CCDC168Q8NDH2 2452 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 TNRC6AQ8NDV7 1962 aaKnown RBP8.39□□□□□ -1.07
XRN1-212ENST00000486211 M0QYT0 321 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 EXOC3O60645 756 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 RFPL1O75677 317 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 CPNE6O95741 557 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 PRNPP04156 253 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 FURINP09958 794 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 SRCP12931 536 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 TCN2P20062 427 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 TACR2P21452 398 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 MAP4P27816 1152 aaKnown RBP8.38□□□□□ -1.07
XRN1-212ENST00000486211 EIF4A3P38919 411 aaKnown RBP8.38□□□□□ -1.07
XRN1-212ENST00000486211 PIK3CAP42336 1068 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 NEK3P51956 506 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 PMS2P54278 862 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 RAD23BP54727 409 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 YPEL5P62699 121 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 HLTFQ14527 1009 aaKnown RBP eCLIP8.38□□□□□ -1.07
XRN1-212ENST00000486211 DBN1Q16643 649 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 ZXDCQ2QGD7 858 aaPredicted RBP8.38□□□□□ -1.07
XRN1-212ENST00000486211 ALG11Q2TAA5 492 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 MAP9Q49MG5 647 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 RAP1GAP2Q684P5 730 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 KCTD16Q68DU8 428 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 C16orf46Q6P387 395 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 PIM3Q86V86 326 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 ZSCAN30Q86W11 494 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 NELFCDQ8IXH7 590 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 NLGN4XQ8N0W4 816 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 BMPERQ8N8U9 685 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 NLGN4YQ8NFZ3 816 aaPredicted RBP8.38□□□□□ -1.07
XRN1-212ENST00000486211 GRIN3AQ8TCU5 1115 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 KCTD13Q8WZ19 329 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 CCDC74BQ96LY2 380 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 C5orf34Q96MH7 638 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 FEM1AQ9BSK4 669 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 EFHD1Q9BUP0 239 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 BACH2Q9BYV9 841 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 NIF3L1Q9GZT8 377 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 CNGB3Q9NQW8 809 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.38□□□□□ -1.07
XRN1-212ENST00000486211 CCDC39Q9UFE4 941 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 TLR6Q9Y2C9 796 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 MRPS18BQ9Y676 258 aaKnown RBP8.38□□□□□ -1.07
XRN1-212ENST00000486211 SVILO95425 2214 aa8.38□□□□□ -1.07
XRN1-212ENST00000486211 K7ERQ8 282 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 SMAD6O43541 496 aaKnown RBP8.37□□□□□ -1.07
XRN1-212ENST00000486211 NUDT21O43809 227 aaKnown RBP8.37□□□□□ -1.07
XRN1-212ENST00000486211 LEFTY1O75610 366 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 BMP15O95972 392 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 MOCS2O96007 188 aaPredicted RBP8.37□□□□□ -1.07
XRN1-212ENST00000486211 FYNP06241 537 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 F8A1P23610 371 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 SCTRP47872 440 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 BLKP51451 505 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 COPB1P53618 953 aaKnown RBP8.37□□□□□ -1.07
XRN1-212ENST00000486211 ABHD18Q0P651 414 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 SGCGQ13326 291 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 GOLGA7BQ2TAP0 167 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 ANKS6Q68DC2 871 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 SPNS3Q6ZMD2 512 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 PARS2Q7L3T8 475 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms