RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 COILP38432 576 aaPredicted RBP17.3■□□□□ 0.36
VIM-205ENST00000485947 MAPKAPK2P49137 400 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 STK19P49842 368 aaPredicted RBP17.3■□□□□ 0.36
VIM-205ENST00000485947 IRAK1P51617 712 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 DYNLT1P63172 113 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 RACK1P63244 317 aaKnown RBP17.3■□□□□ 0.36
VIM-205ENST00000485947 GRIK2Q13002 908 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 NOMO1Q15155 1222 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 DLG2Q15700 870 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 ACCSLQ4AC99 568 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 FAM72AQ5TYM5 149 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 FAM72DQ6L9T8 149 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 FAM72BQ86X60 149 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 KLHL7Q8IXQ5 586 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 PLD5Q8N7P1 536 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 OR52K2Q8NGK3 314 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 GRK7Q8WTQ7 553 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 MAGEB5Q9BZ81 275 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 CEP44Q9C0F1 390 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 DDX47Q9H0S4 455 aaKnown RBP17.3■□□□□ 0.36
VIM-205ENST00000485947 NEUROG2Q9H2A3 272 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 CATSPERBQ9H7T0 1116 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 ZNF212Q9UDV6 495 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 PCYOX1Q9UHG3 505 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 FEZ2Q9UHY8 353 aaPredicted RBP17.3■□□□□ 0.36
VIM-205ENST00000485947 ANGPTL2Q9UKU9 493 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 PPM1HQ9ULR3 514 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 PCDHGB2Q9Y5G2 931 aa17.3■□□□□ 0.36
VIM-205ENST00000485947 DOCK4Q8N1I0 1966 aa17.29■□□□□ 0.36
VIM-205ENST00000485947 A0A1W2PP55 124 aa17.29■□□□□ 0.36
VIM-205ENST00000485947 A0A1W2PPC4 97 aa17.29■□□□□ 0.36
VIM-205ENST00000485947 LIASO43766 372 aa17.29■□□□□ 0.36
VIM-205ENST00000485947 AMPD1P23109 780 aa17.29■□□□□ 0.36
VIM-205ENST00000485947 SERPINB6P35237 376 aa17.29■□□□□ 0.36
VIM-205ENST00000485947 NR2C2P49116 596 aa17.29■□□□□ 0.36
VIM-205ENST00000485947 GEMIN4P57678 1058 aaKnown RBP17.29■□□□□ 0.36
VIM-205ENST00000485947 PAFAH1B3Q15102 231 aaKnown RBP17.29■□□□□ 0.36
VIM-205ENST00000485947 NCBP2-AS2Q69YL0 99 aa17.29■□□□□ 0.36
VIM-205ENST00000485947 CCDC137Q6PK04 289 aaKnown RBP17.29■□□□□ 0.36
VIM-205ENST00000485947 TMIEQ8NEW7 156 aa17.29■□□□□ 0.36
VIM-205ENST00000485947 ACTL9Q8TC94 416 aa17.29■□□□□ 0.36
VIM-205ENST00000485947 C1orf54Q8WWF1 131 aa17.29■□□□□ 0.36
VIM-205ENST00000485947 P3H4Q92791 437 aa17.29■□□□□ 0.36
VIM-205ENST00000485947 SLCO2A1Q92959 643 aa17.29■□□□□ 0.36
VIM-205ENST00000485947 DONSONQ9NYP3 566 aa17.29■□□□□ 0.36
VIM-205ENST00000485947 VPS51Q9UID3 782 aa17.29■□□□□ 0.36
VIM-205ENST00000485947 DRG1Q9Y295 367 aaKnown RBP17.29■□□□□ 0.36
VIM-205ENST00000485947 R3HDM2Q9Y2K5 976 aaKnown RBP17.29■□□□□ 0.36
VIM-205ENST00000485947 FAM187AA6NFU0 413 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 WASH4PA8MWX3 477 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 ZNF189O75820 626 aaPredicted RBP17.28■□□□□ 0.36
VIM-205ENST00000485947 FSBPO95073 299 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 IGHV4-34P06331 123 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 SRCP12931 536 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 RHOQP17081 205 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 ERCC2P18074 760 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 EPHB2P29323 1055 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 GGCXP38435 758 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 PSMD8P48556 350 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 OTUD4Q01804 1114 aaKnown RBP17.28■□□□□ 0.36
VIM-205ENST00000485947 ARTNQ5T4W7 220 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 TMCO3Q6UWJ1 677 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 PLPP6Q8IY26 295 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 AADATQ8N5Z0 425 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 ATP11CQ8NB49 1132 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 ATL2Q8NHH9 583 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 SLC35B2Q8TB61 432 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 SNX19Q92543 992 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 TM9SF3Q9HD45 589 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 MPP6Q9NZW5 540 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 NEU3Q9UQ49 428 aa17.28■□□□□ 0.36
VIM-205ENST00000485947 ASCC3Q8N3C0 2202 aaKnown RBP17.28■□□□□ 0.36
VIM-205ENST00000485947 SPEGQ15772 3267 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 LATO43561 262 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 TRIM16O95361 564 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 PRNPP04156 253 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 CD59P13987 128 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 HOXB3P14651 431 aaPredicted RBP17.27■□□□□ 0.36
VIM-205ENST00000485947 RECQLP46063 649 aaPredicted RBP17.27■□□□□ 0.36
VIM-205ENST00000485947 ADPRHP54922 357 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 GNA12Q03113 381 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 XRCC4Q13426 336 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 SUZ12Q15022 739 aaKnown RBP17.27■□□□□ 0.36
VIM-205ENST00000485947 NEK5Q6P3R8 708 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 TTC27Q6P3X3 843 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 NCEH1Q6PIU2 408 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 DBX2Q6ZNG2 339 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 SYDE1Q6ZW31 735 aaPredicted RBP17.27■□□□□ 0.36
VIM-205ENST00000485947 TFAP2DQ7Z6R9 452 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 LZTR1Q8N653 840 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 ATG4AQ8WYN0 398 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 ISG20Q96AZ6 181 aaKnown RBP17.27■□□□□ 0.36
VIM-205ENST00000485947 ORAI3Q9BRQ5 295 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 LRRC1Q9BTT6 524 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 MAGEH1Q9H213 219 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 TMEM248Q9NWD8 314 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 SERGEFQ9UGK8 458 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 DMTF1Q9Y222 760 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 SNX10Q9Y5X0 201 aa17.27■□□□□ 0.36
VIM-205ENST00000485947 A0A0D9SEW6 157 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms