RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 GLOD4Q9HC38 313 aa15.65■□□□□ 0.1
RPUSD3-217ENST00000485705 WSB2Q9NYS7 404 aaPredicted RBP15.65■□□□□ 0.1
RPUSD3-217ENST00000485705 KLHL8Q9P2G9 620 aaPredicted RBP15.65■□□□□ 0.1
RPUSD3-217ENST00000485705 TTC7AQ9ULT0 858 aaPredicted RBP15.65■□□□□ 0.1
RPUSD3-217ENST00000485705 SAR1BQ9Y6B6 198 aa15.65■□□□□ 0.1
RPUSD3-217ENST00000485705 DMDP11532 3685 aa15.65■□□□□ 0.1
RPUSD3-217ENST00000485705 PGRMC1O00264 195 aaKnown RBP15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 CES2O00748 559 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 TRAFD1O14545 582 aaPredicted RBP15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 TIMP2P16035 220 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 ITIH2P19823 946 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 NFKB1P19838 968 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 CD86P42081 329 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 ABL2P42684 1182 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 KCNJ1P48048 391 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 TAS2R38P59533 333 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 SKOR1P84550 965 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 BYSLQ13895 437 aaKnown RBP15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 CCNG2Q16589 344 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 KCTD19Q17RG1 926 aaPredicted RBP15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 LRRC73Q5JTD7 316 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 USP30Q70CQ3 517 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 ERN2Q76MJ5 926 aaKnown RBP15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 PID1Q7Z2X4 250 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 PRPF39Q86UA1 669 aaKnown RBP15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 CREG2Q8IUH2 290 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 CCDC110Q8TBZ0 833 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 MAIP1Q8WWC4 291 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 ATOH1Q92858 354 aaPredicted RBP15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 SPACA7Q96KW9 195 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 RBM15Q96T37 977 aaKnown RBP eCLIP15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 HDAC8Q9BY41 377 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 FRMD8P1Q9BZ68 369 aaPredicted RBP15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 KCNH6Q9H252 994 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 ATP13A3Q9H7F0 1226 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 DYRK4Q9NR20 520 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 NCKAP1Q9Y2A7 1128 aa15.64■□□□□ 0.09
RPUSD3-217ENST00000485705 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 PRKCGP05129 697 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 SERPINA4P29622 427 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 OXTRP30559 389 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 HOXD11P31277 338 aaPredicted RBP15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 MAPK8P45983 427 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 NEK3P51956 506 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 ADPRHP54922 357 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 GRM3Q14832 879 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 RALGPS1Q5JS13 557 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 ANKRD20A2Q5SQ80 823 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 ANKRD20A1Q5TYW2 823 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 ANKRD20A3Q5VUR7 823 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 PRUNE1Q86TP1 453 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 KBTBD6Q86V97 674 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 OR14C36Q8NHC7 312 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 SPATA22Q8NHS9 363 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 PDCD6IPQ8WUM4 868 aaKnown RBP15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 ECHDC3Q96DC8 303 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 IMP4Q96G21 291 aaKnown RBP15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 PPP1R16AQ96I34 528 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 ZNF641Q96N77 438 aaPredicted RBP15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 SPATA13Q96N96 652 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 VAT1Q99536 393 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 GPR174Q9BXC1 333 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 BTBD1Q9H0C5 482 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 SLC25A51Q9H1U9 297 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 DKK3Q9UBP4 350 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 FZD4Q9ULV1 537 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 ZNF148Q9UQR1 794 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 HCN4Q9Y3Q4 1203 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 RAI2Q9Y5P3 530 aa15.63■□□□□ 0.09
RPUSD3-217ENST00000485705 TNRC6BQ9UPQ9 1833 aaKnown RBP15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 RALGAPA1Q6GYQ0 2036 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 TSPAN11A1L157 253 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 C5orf60A6NFR6 353 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 FAM47DPA6NHR8 397 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 PDE2AO00408 941 aaPredicted RBP15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 SPINT1O43278 529 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 HTRA2O43464 458 aaPredicted RBP15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 MT-CYBP00156 380 aaPredicted RBP15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 ADRB3P13945 408 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 ETS1P14921 441 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 CES1P23141 567 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 CNR2P34972 360 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 SEMG2Q02383 582 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 SIM2Q14190 667 aaPredicted RBP15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 LPAL2Q16609 132 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 FBXL19Q6PCT2 694 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 DRICH1Q6PGQ1 229 aaPredicted RBP15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 CEP68Q76N32 757 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 TADA1Q96BN2 335 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 SMIM14Q96QK8 99 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 FERMT1Q9BQL6 677 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 GORASP1Q9BQQ3 440 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 C6orf106Q9H6K1 298 aaPredicted RBP15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 SGK2Q9HBY8 427 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 HAUS2Q9NVX0 235 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 UBP1Q9NZI7 540 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 GGT7Q9UJ14 662 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 TRHDEQ9UKU6 1024 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 ITM2BQ9Y287 266 aa15.62■□□□□ 0.09
RPUSD3-217ENST00000485705 PCDHB9Q9Y5E1 797 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms