RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 CDCP2Q5VXM1 449 aa17.36■□□□□ 0.37
SMC4-216ENST00000485645 ZCCHC8Q6NZY4 707 aaKnown RBP17.36■□□□□ 0.37
SMC4-216ENST00000485645 APTXQ7Z2E3 356 aaKnown RBP17.36■□□□□ 0.37
SMC4-216ENST00000485645 VPS36Q86VN1 386 aa17.36■□□□□ 0.37
SMC4-216ENST00000485645 UMODL1-AS1Q8N2C9 162 aa17.36■□□□□ 0.37
SMC4-216ENST00000485645 NETO2Q8NC67 525 aa17.36■□□□□ 0.37
SMC4-216ENST00000485645 SNIP1Q8TAD8 396 aaKnown RBP17.36■□□□□ 0.37
SMC4-216ENST00000485645 LMX1AQ8TE12 382 aa17.36■□□□□ 0.37
SMC4-216ENST00000485645 BTN2A2Q8WVV5 523 aa17.36■□□□□ 0.37
SMC4-216ENST00000485645 FGF11Q92914 225 aa17.36■□□□□ 0.37
SMC4-216ENST00000485645 CRELD1Q96HD1 420 aa17.36■□□□□ 0.37
SMC4-216ENST00000485645 DEPDC7Q96QD5 511 aa17.36■□□□□ 0.37
SMC4-216ENST00000485645 C1QTNF7Q9BXJ2 289 aa17.36■□□□□ 0.37
SMC4-216ENST00000485645 CPEB1Q9BZB8 566 aaKnown RBP17.36■□□□□ 0.37
SMC4-216ENST00000485645 DONSONQ9NYP3 566 aa17.36■□□□□ 0.37
SMC4-216ENST00000485645 NCKIPSDQ9NZQ3 722 aa17.36■□□□□ 0.37
SMC4-216ENST00000485645 DKK3Q9UBP4 350 aa17.36■□□□□ 0.37
SMC4-216ENST00000485645 U3KQA8 63 aa17.36■□□□□ 0.37
SMC4-216ENST00000485645 IGSF10Q6WRI0 2623 aa17.36■□□□□ 0.37
SMC4-216ENST00000485645 LOC400499M0QZD8 3231 aa17.36■□□□□ 0.37
SMC4-216ENST00000485645 BAHCC1Q9P281 2608 aa17.35■□□□□ 0.37
SMC4-216ENST00000485645 FASNP49327 2511 aaKnown RBP17.35■□□□□ 0.37
SMC4-216ENST00000485645 TIMP2P16035 220 aa17.35■□□□□ 0.37
SMC4-216ENST00000485645 TNFAIP3P21580 790 aa17.35■□□□□ 0.37
SMC4-216ENST00000485645 XPAP23025 273 aaPredicted RBP17.35■□□□□ 0.37
SMC4-216ENST00000485645 TPI1P60174 286 aa17.35■□□□□ 0.37
SMC4-216ENST00000485645 YPEL5P62699 121 aa17.35■□□□□ 0.37
SMC4-216ENST00000485645 EIF2B5Q13144 721 aaKnown RBP17.35■□□□□ 0.37
SMC4-216ENST00000485645 PPP1R2P3Q6NXS1 205 aa17.35■□□□□ 0.37
SMC4-216ENST00000485645 IFI44Q8TCB0 444 aa17.35■□□□□ 0.37
SMC4-216ENST00000485645 VCPIP1Q96JH7 1222 aa17.35■□□□□ 0.37
SMC4-216ENST00000485645 IL12RB2Q99665 862 aa17.35■□□□□ 0.37
SMC4-216ENST00000485645 NCAPGQ9BPX3 1015 aa17.35■□□□□ 0.37
SMC4-216ENST00000485645 HSD3B7Q9H2F3 369 aa17.35■□□□□ 0.37
SMC4-216ENST00000485645 SPASTQ9UBP0 616 aa17.35■□□□□ 0.37
SMC4-216ENST00000485645 SALL4Q9UJQ4 1053 aa17.35■□□□□ 0.37
SMC4-216ENST00000485645 PCDHB1Q9Y5F3 818 aa17.35■□□□□ 0.37
SMC4-216ENST00000485645 TOR1BO14657 336 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 RIOK3O14730 519 aaKnown RBP17.34■□□□□ 0.37
SMC4-216ENST00000485645 TPP1O14773 563 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 ATP1A3P13637 1013 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 ITIH2P19823 946 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 HTR7P34969 479 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 IGFALSP35858 605 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 SUOXP51687 545 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 ELP6Q0PNE2 266 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 GRM3Q14832 879 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 ACAP1Q15027 740 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 CYTH1Q15438 398 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 KLHL40Q2TBA0 621 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 DEFB133Q30KQ1 61 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 TBC1D25Q3MII6 688 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 CCDC183Q5T5S1 534 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 IRF2BP2Q7Z5L9 587 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 DNAAF5Q86Y56 855 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 AOPEPQ8N6M6 819 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 MAPK15Q8TD08 544 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 EXOC2Q96KP1 924 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 WRAP53Q9BUR4 548 aaKnown RBP17.34■□□□□ 0.37
SMC4-216ENST00000485645 TAS2R14Q9NYV8 317 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 LHX3Q9UBR4 397 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 UBA2Q9UBT2 640 aaPredicted RBP17.34■□□□□ 0.37
SMC4-216ENST00000485645 APOBEC3BQ9UH17 382 aaKnown RBP17.34■□□□□ 0.37
SMC4-216ENST00000485645 MYO6Q9UM54 1294 aa17.34■□□□□ 0.37
SMC4-216ENST00000485645 SMG1Q96Q15 3661 aaKnown RBP17.34■□□□□ 0.37
SMC4-216ENST00000485645 CPED1A4D0V7 1026 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 EIF4E1BA6NMX2 242 aaKnown RBP17.33■□□□□ 0.36
SMC4-216ENST00000485645 TMCO5BA8MYB1 307 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 INSIG1O15503 277 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 PSMA2P25787 234 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 NDST2P52849 883 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 OGDHQ02218 1023 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 CDKN3Q16667 212 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 TMEM52BQ4KMG9 183 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 PRRT3Q5FWE3 981 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 PHACTR4Q8IZ21 702 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 RBFAQ8N0V3 343 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 TP53I13Q8NBR0 393 aaPredicted RBP17.33■□□□□ 0.36
SMC4-216ENST00000485645 HCAR2Q8TDS4 363 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 GLMNQ92990 594 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 SLC13A1Q9BZW2 595 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 SUV39H2Q9H5I1 410 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 LRRC19Q9H756 370 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 MBNL1Q9NR56 388 aaKnown RBP17.33■□□□□ 0.36
SMC4-216ENST00000485645 PARVAQ9NVD7 372 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 GPATCH2LQ9NWQ4 482 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 AP4E1Q9UPM8 1137 aa17.33■□□□□ 0.36
SMC4-216ENST00000485645 EME2A4GXA9 379 aaPredicted RBP17.32■□□□□ 0.36
SMC4-216ENST00000485645 TEX33O43247 280 aa17.32■□□□□ 0.36
SMC4-216ENST00000485645 USP12O75317 370 aa17.32■□□□□ 0.36
SMC4-216ENST00000485645 CSO75390 466 aaKnown RBP17.32■□□□□ 0.36
SMC4-216ENST00000485645 PIGNO95427 931 aa17.32■□□□□ 0.36
SMC4-216ENST00000485645 MBD3O95983 291 aa17.32■□□□□ 0.36
SMC4-216ENST00000485645 EIF4A3P38919 411 aaKnown RBP17.32■□□□□ 0.36
SMC4-216ENST00000485645 ADKP55263 362 aaKnown RBP17.32■□□□□ 0.36
SMC4-216ENST00000485645 TYRO3Q06418 890 aa17.32■□□□□ 0.36
SMC4-216ENST00000485645 MAMLD1Q13495 774 aa17.32■□□□□ 0.36
SMC4-216ENST00000485645 NR0B2Q15466 257 aa17.32■□□□□ 0.36
SMC4-216ENST00000485645 CFAP58Q5T655 872 aa17.32■□□□□ 0.36
SMC4-216ENST00000485645 FAXCQ5TGI0 409 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms