RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	FRG1	Q14331	258 aa	Known RBP	4.27	□□□□□ -1.73
FN1-222	ENST00000485567	PPP2R5B	Q15173	497 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	TMEM119	Q4V9L6	283 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	MIDN	Q504T8	468 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	MFSD4B	Q5TF39	518 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	STRIP1	Q5VSL9	837 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	MIS18BP1	Q6P0N0	1132 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	TSSK4	Q6SA08	328 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	ZNF788	Q6ZQV5	615 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	DHX40	Q8IX18	779 aa	Known RBP	4.27	□□□□□ -1.73
FN1-222	ENST00000485567	KIAA2013	Q8IYS2	634 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	SRBD1	Q8N5C6	995 aa	Known RBP	4.27	□□□□□ -1.73
FN1-222	ENST00000485567	BOLL	Q8N9W6	283 aa	Known RBP	4.27	□□□□□ -1.73
FN1-222	ENST00000485567	IGFBPL1	Q8WX77	278 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	NELL1	Q92832	810 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	SNAPC3	Q92966	411 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	RNF183	Q96D59	192 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	MMAB	Q96EY8	250 aa	Predicted RBP	4.27	□□□□□ -1.73
FN1-222	ENST00000485567	ZNF333	Q96JL9	665 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	WDFY2	Q96P53	400 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	WDR83	Q9BRX9	315 aa	Known RBP	4.27	□□□□□ -1.73
FN1-222	ENST00000485567	SEMA4C	Q9C0C4	833 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	SH2D4A	Q9H788	454 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	POLR1B	Q9H9Y6	1135 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	WDR6	Q9NNW5	1121 aa	Known RBP	4.27	□□□□□ -1.73
FN1-222	ENST00000485567	PNRC2	Q9NPJ4	139 aa	Known RBP	4.27	□□□□□ -1.73
FN1-222	ENST00000485567	TMEM45A	Q9NWC5	275 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	ABI3	Q9P2A4	366 aa		4.27	□□□□□ -1.73
FN1-222	ENST00000485567	ARID1B	Q8NFD5	2236 aa	Predicted RBP	4.26	□□□□□ -1.73
FN1-222	ENST00000485567	TRBV5-3	A0A0A0MS03	114 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	DDTL	A6NHG4	134 aa	Predicted RBP	4.26	□□□□□ -1.73
FN1-222	ENST00000485567	CYR61	O00622	381 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	HSPB6	O14558	160 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	SLC25A17	O43808	307 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	PGM3	O95394	542 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	MMP3	P08254	477 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	PRR35	P0CG20	571 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	COPB2	P35606	906 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	GDF5	P43026	501 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	IFI35	P80217	286 aa	Predicted RBP	4.26	□□□□□ -1.73
FN1-222	ENST00000485567	ZXDA	P98168	799 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	CEBPZ	Q03701	1054 aa	Known RBP	4.26	□□□□□ -1.73
FN1-222	ENST00000485567	STK4	Q13043	487 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	BECN1	Q14457	450 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	FGFBP1	Q14512	234 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	KRT24	Q2M2I5	525 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	PLEKHO1	Q53GL0	409 aa	Predicted RBP	4.26	□□□□□ -1.73
FN1-222	ENST00000485567	RAB41	Q5JT25	222 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	ENTPD8	Q5MY95	495 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	PAPD7	Q5XG87	772 aa	Known RBP	4.26	□□□□□ -1.73
FN1-222	ENST00000485567	JADE1	Q6IE81	842 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	HMBOX1	Q6NT76	420 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	FBXO42	Q6P3S6	717 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.26	□□□□□ -1.73
FN1-222	ENST00000485567	CHST9	Q7L1S5	443 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	PRPF39	Q86UA1	669 aa	Known RBP	4.26	□□□□□ -1.73
FN1-222	ENST00000485567	TAGAP	Q8N103	731 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	CMAS	Q8NFW8	434 aa	Predicted RBP	4.26	□□□□□ -1.73
FN1-222	ENST00000485567	SIGLEC11	Q96RL6	698 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	NCAPG	Q9BPX3	1015 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	SH2D3A	Q9BRG2	576 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	CENPO	Q9BU64	300 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	SLC6A13	Q9NSD5	602 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	PLK2	Q9NYY3	685 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.26	□□□□□ -1.73
FN1-222	ENST00000485567	ZNHIT2	Q9UHR6	403 aa		4.26	□□□□□ -1.73
FN1-222	ENST00000485567	FAM237A	A0A1B0GTK4	181 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	TYW5	A2RUC4	315 aa	Known RBP	4.25	□□□□□ -1.73
FN1-222	ENST00000485567	CDRT15L2	A8MXV6	281 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	KLRF2	D3W0D1	207 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	PPP6C	O00743	305 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	TP73	O15350	636 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	BEST1	O76090	585 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	ENO3	P13929	434 aa	Predicted RBP	4.25	□□□□□ -1.73
FN1-222	ENST00000485567	SRD5A1	P18405	259 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	ATP5F1	P24539	256 aa	Predicted RBP	4.25	□□□□□ -1.73
FN1-222	ENST00000485567	HOXA13	P31271	388 aa	Predicted RBP	4.25	□□□□□ -1.73
FN1-222	ENST00000485567	KRT20	P35900	424 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	CDH8	P55286	799 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	PROK1	P58294	105 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	POU5F1	Q01860	360 aa	Known RBP	4.25	□□□□□ -1.73
FN1-222	ENST00000485567	KLF10	Q13118	480 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	RUNX2	Q13950	521 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	IRF3	Q14653	427 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	DAZAP2	Q15038	168 aa	Predicted RBP	4.25	□□□□□ -1.73
FN1-222	ENST00000485567	ALG11	Q2TAA5	492 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	SOWAHC	Q53LP3	525 aa	Predicted RBP	4.25	□□□□□ -1.73
FN1-222	ENST00000485567	PIK3CD-AS1	Q5SR53	167 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	LCE4A	Q5TA78	99 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	PDXDC1	Q6P996	788 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	TMCO3	Q6UWJ1	677 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.25	□□□□□ -1.73
FN1-222	ENST00000485567	ZNF66	Q6ZN08	573 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	DBX2	Q6ZNG2	339 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	KDM1B	Q8NB78	822 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	SLC44A5	Q8NCS7	719 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	RASSF8	Q8NHQ8	419 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	ATOH1	Q92858	354 aa	Predicted RBP	4.25	□□□□□ -1.73
FN1-222	ENST00000485567	JAKMIP2	Q96AA8	810 aa		4.25	□□□□□ -1.73
FN1-222	ENST00000485567	C1orf74	Q96LT6	269 aa		4.25	□□□□□ -1.73

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