RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 TM6SF2Q9BZW4 377 aa13.2□□□□□ -0.3
HDAC6-227ENST00000485102 CLPBQ9H078 707 aa13.2□□□□□ -0.3
HDAC6-227ENST00000485102 PDCL3Q9H2J4 239 aa13.2□□□□□ -0.3
HDAC6-227ENST00000485102 TCEAL2Q9H3H9 227 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-227ENST00000485102 NDFIP2Q9NV92 336 aa13.2□□□□□ -0.3
HDAC6-227ENST00000485102 PNMA8BQ9ULN7 279 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-227ENST00000485102 PADI4Q9UM07 663 aa13.2□□□□□ -0.3
HDAC6-227ENST00000485102 HPCAL4Q9UM19 191 aa13.2□□□□□ -0.3
HDAC6-227ENST00000485102 ACTL7AQ9Y615 435 aa13.2□□□□□ -0.3
HDAC6-227ENST00000485102 TMEM110-MUSTN1A8MSY1 372 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 MUSKO15146 869 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 TM7SF2O76062 418 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 TNFSF15O95150 251 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 TSHRP16473 764 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 IGFALSP35858 605 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 EIF4A3P38919 411 aaKnown RBP13.19□□□□□ -0.3
HDAC6-227ENST00000485102 NOMO3P69849 1222 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 PPARDQ03181 441 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
HDAC6-227ENST00000485102 SPIDRQ14159 915 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 INO80DQ53TQ3 878 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-227ENST00000485102 MIIPQ5JXC2 388 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 KLHDC7AQ5VTJ3 777 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 ESRP1Q6NXG1 681 aaKnown RBP13.19□□□□□ -0.3
HDAC6-227ENST00000485102 CCDC81Q6ZN84 652 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 STRADAQ7RTN6 431 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 TTC7BQ86TV6 843 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 RBFAQ8N0V3 343 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 TP53I13Q8NBR0 393 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-227ENST00000485102 OR6C4Q8NGE1 309 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 CENPIQ92674 756 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-227ENST00000485102 CCNL2Q96S94 520 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-227ENST00000485102 CCDC3Q9BQI4 270 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 NDST4Q9H3R1 872 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 GGT7Q9UJ14 662 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 ATXN7L1Q9ULK2 861 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-227ENST00000485102 NEU3Q9UQ49 428 aa13.19□□□□□ -0.3
HDAC6-227ENST00000485102 KRIT1O00522 736 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 KDELR3O43731 214 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 UGT2B4P06133 528 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 GKP32189 559 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 HK3P52790 923 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 RAD51Q06609 339 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 C1orf61Q13536 156 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 AGERQ15109 404 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 ELOCQ15369 112 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 VWA3BQ502W6 1294 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 FAXCQ5TGI0 409 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 GDPD4Q6W3E5 623 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 ZNF677Q86XU0 584 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 FAM114A1Q8IWE2 563 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 ARL10Q8N8L6 244 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 SCG3Q8WXD2 468 aaKnown RBP13.18□□□□□ -0.3
HDAC6-227ENST00000485102 KLHL32Q96NJ5 620 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 STK33Q9BYT3 514 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 CPEB1Q9BZB8 566 aaKnown RBP13.18□□□□□ -0.3
HDAC6-227ENST00000485102 TTYH3Q9C0H2 523 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 MBNL1Q9NR56 388 aaKnown RBP13.18□□□□□ -0.3
HDAC6-227ENST00000485102 ITM2BQ9Y287 266 aa13.18□□□□□ -0.3
HDAC6-227ENST00000485102 C2CD4BA6NLJ0 364 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 GOLGA8SH3BPF8 625 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 PLD2O14939 933 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 EFSO43281 561 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 MMP20O60882 483 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 RAMP2O60895 175 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 LRIG2O94898 1065 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 ALPIP09923 528 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 UCHL3P15374 230 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 TIMP2P16035 220 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 MMP8P22894 467 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 CCKBRP32239 447 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 PTPN9P43378 593 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 CCDC14Q49A88 953 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 TMEM52BQ4KMG9 183 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 C2CD6Q53TS8 623 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 CRTC1Q6UUV9 634 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 SASS6Q6UVJ0 657 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 NOP9Q86U38 636 aaKnown RBP13.17□□□□□ -0.3
HDAC6-227ENST00000485102 VPS36Q86VN1 386 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 RYBPQ8N488 228 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-227ENST00000485102 OR6K2Q8NGY2 324 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 EPS8L1Q8TE68 723 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 NTAN1Q96AB6 310 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 GDAP1L1Q96MZ0 367 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 TUBGCP2Q9BSJ2 902 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 EDEM3Q9BZQ6 932 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 CLMPQ9H6B4 373 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 DNAI1Q9UI46 699 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 FHOD1Q9Y613 1164 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 BSNQ9UPA5 3926 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 HECTD1Q9ULT8 2610 aa13.17□□□□□ -0.3
HDAC6-227ENST00000485102 SCN8AQ9UQD0 1980 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 ARHGEF17Q96PE2 2063 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-227ENST00000485102 PMS2P1A4D2B8 440 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 FAM72CH0Y354 149 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 NVLO15381 856 aaKnown RBP13.16□□□□□ -0.3
HDAC6-227ENST00000485102 NOBOXO60393 691 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 TMCC1O94876 653 aa13.16□□□□□ -0.3
HDAC6-227ENST00000485102 CYP1A1P04798 512 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-227ENST00000485102 PLEKP08567 350 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms