RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 EXOC2Q96KP1 924 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 KLHL32Q96NJ5 620 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 NUDCD1Q96RS6 583 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 NUSAP1Q9BXS6 441 aaKnown RBP17.99■□□□□ 0.47
SREBF1-213ENST00000485080 SUV39H2Q9H5I1 410 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 ATP13A3Q9H7F0 1226 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 AMFRQ9UKV5 643 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 DMTF1Q9Y222 760 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 FADS3Q9Y5Q0 445 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 TRPM6Q9BX84 2022 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-213ENST00000485080 LNP1A1A4G5 178 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 FAM47DPA6NHR8 397 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 MIF4GDA9UHW6 222 aaKnown RBP17.98■□□□□ 0.47
SREBF1-213ENST00000485080 PATE3B3GLJ2 98 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 AREL1O15033 823 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 TSPAN6O43657 245 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 CCDC175P0C221 793 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 TGM2P21980 687 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 CES1P23141 567 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 MAOBP27338 520 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 MMP13P45452 471 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 IRX4P78413 519 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 HORMAD1Q86X24 394 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 RFX6Q8HWS3 928 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 PGBD5Q8N414 524 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 PDLIM2Q96JY6 352 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 ZDHHC5Q9C0B5 715 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 SMOC1Q9H4F8 434 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 EBF2Q9HAK2 575 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 HAUS2Q9NVX0 235 aa17.98■□□□□ 0.47
SREBF1-213ENST00000485080 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.98■□□□□ 0.47
SREBF1-213ENST00000485080 A0A1W2PQ67 120 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 PPP1R12AO14974 1030 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-213ENST00000485080 HTRA2O43464 458 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-213ENST00000485080 CST8O60676 142 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 RNGTTO60942 597 aaKnown RBP17.97■□□□□ 0.47
SREBF1-213ENST00000485080 SOCS5O75159 536 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 TIMP2P16035 220 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 SDHBP21912 280 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 SERPINA4P29622 427 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 AFF3P51826 1226 aaKnown RBP17.97■□□□□ 0.47
SREBF1-213ENST00000485080 RWDD2BP57060 319 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 PPP2CBP62714 309 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 RACK1P63244 317 aaKnown RBP17.97■□□□□ 0.47
SREBF1-213ENST00000485080 PPP2CAP67775 309 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 IFI35P80217 286 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-213ENST00000485080 TMEM259Q4ZIN3 620 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 TCEAL6Q6IPX3 200 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 KIAA1161Q6NSJ0 714 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 BBS12Q6ZW61 710 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 PEX26Q7Z412 305 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 PRPF39Q86UA1 669 aaKnown RBP17.97■□□□□ 0.47
SREBF1-213ENST00000485080 CCDC13Q8IYE1 715 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 ZCCHC9Q8N567 271 aaKnown RBP17.97■□□□□ 0.47
SREBF1-213ENST00000485080 ASB12Q8WXK4 309 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 TCEAL3Q969E4 200 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 TM9SF3Q9HD45 589 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 HEY1Q9Y5J3 304 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 PCDH15Q96QU1 1955 aa17.97■□□□□ 0.47
SREBF1-213ENST00000485080 ATXN2Q99700 1313 aaKnown RBP17.97■□□□□ 0.47
SREBF1-213ENST00000485080 CACNA1AO00555 2505 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 TRAFD1O14545 582 aaPredicted RBP17.96■□□□□ 0.47
SREBF1-213ENST00000485080 SPINT1O43278 529 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 MAP3K6O95382 1288 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 PIGNO95427 931 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 SYPP08247 313 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 KRT10P13645 584 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 CCNB1P14635 433 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 ABL2P42684 1182 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 GRIA4P48058 902 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 SCNN1BP51168 640 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 RPS21P63220 83 aaKnown RBP17.96■□□□□ 0.47
SREBF1-213ENST00000485080 BCL2L1Q07817 233 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 ZNF284Q2VY69 593 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 SETMARQ53H47 684 aaPredicted RBP17.96■□□□□ 0.47
SREBF1-213ENST00000485080 UBL4BQ8N7F7 174 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 NETO1Q8TDF5 533 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 ALG3Q92685 438 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 ANP32BQ92688 251 aaKnown RBP17.96■□□□□ 0.47
SREBF1-213ENST00000485080 HES6Q96HZ4 224 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 FEM1CQ96JP0 617 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 NSMCE3Q96MG7 304 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 LGMNQ99538 433 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 IL12RB2Q99665 862 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 POLR1EQ9GZS1 481 aaKnown RBP17.96■□□□□ 0.47
SREBF1-213ENST00000485080 MIR1-1HGQ9H1L0 117 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 CAPN6Q9Y6Q1 641 aa17.96■□□□□ 0.47
SREBF1-213ENST00000485080 DOCK9Q9BZ29 2069 aa17.95■□□□□ 0.46
SREBF1-213ENST00000485080 ASCC3Q8N3C0 2202 aaKnown RBP17.95■□□□□ 0.46
SREBF1-213ENST00000485080 A0A1W2PQU0 124 aa17.95■□□□□ 0.46
SREBF1-213ENST00000485080 ARHGAP33O14559 1287 aa17.95■□□□□ 0.46
SREBF1-213ENST00000485080 CFIP05156 583 aa17.95■□□□□ 0.46
SREBF1-213ENST00000485080 CETN2P41208 172 aa17.95■□□□□ 0.46
SREBF1-213ENST00000485080 POLR2LP62875 67 aaKnown RBP17.95■□□□□ 0.46
SREBF1-213ENST00000485080 ADCY2Q08462 1091 aa17.95■□□□□ 0.46
SREBF1-213ENST00000485080 UGP2Q16851 508 aa17.95■□□□□ 0.46
SREBF1-213ENST00000485080 AASDHQ4L235 1098 aaPredicted RBP17.95■□□□□ 0.46
SREBF1-213ENST00000485080 TTC7BQ86TV6 843 aa17.95■□□□□ 0.46
SREBF1-213ENST00000485080 IQCHQ86VS3 1027 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms