RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 KRT72Q14CN4 511 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 PWP2Q15269 919 aaKnown RBP3.35□□□□□ -1.87
VPS50-216ENST00000484954 CTXN3Q4LDR2 81 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 PLEKHO1Q53GL0 409 aaPredicted RBP3.35□□□□□ -1.87
VPS50-216ENST00000484954 XKR9Q5GH70 373 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 FAM69BQ5VUD6 431 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 ANO1Q5XXA6 986 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 CCDC129Q6ZRS4 1044 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 MOB3CQ70IA8 216 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 CHD1LQ86WJ1 897 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 DENND6AQ8IWF6 608 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 CCDC105Q8IYK2 499 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 ANKRD44Q8N8A2 993 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 SPPL3Q8TCT6 385 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 GDPD5Q8WTR4 605 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 TRIB2Q92519 343 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 RNF183Q96D59 192 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 IGSF21Q96ID5 467 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 COG8Q96MW5 612 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 MROH8Q9H579 483 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 DONSONQ9NYP3 566 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 OR6C3Q9NZP0 311 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 CNPY2Q9Y2B0 182 aa3.35□□□□□ -1.87
VPS50-216ENST00000484954 RRP7AQ9Y3A4 280 aaKnown RBP3.35□□□□□ -1.87
VPS50-216ENST00000484954 IGLV5-37A0A075B6J1 123 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 VWA3AA6NCI4 1184 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 CBY3A6NI87 242 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 PEX12O00623 359 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 PER2O15055 1255 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 KLK10O43240 276 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 BUB3O43684 328 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 KIF1CO43896 1103 aaKnown RBP3.34□□□□□ -1.87
VPS50-216ENST00000484954 NBNO60934 754 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 ATP2C2O75185 946 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 TNNT1P13805 278 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 SRD5A1P18405 259 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 FMO4P31512 558 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 GOLGA8FQ08AF8 430 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 SNTA1Q13424 505 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 EFHC1Q5JVL4 640 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 GFI1BQ5VTD9 330 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 NCAPH2Q6IBW4 605 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 LURAP1LQ8IV03 231 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 MUC20Q8N307 709 aaPredicted RBP3.34□□□□□ -1.87
VPS50-216ENST00000484954 TMEM170AQ8WVE7 144 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 RAB40AQ8WXH6 277 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 ERGIC1Q969X5 290 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 TBC1D20Q96BZ9 403 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 CSF3RQ99062 836 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 SDF2L1Q9HCN8 221 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 NOX4Q9NPH5 578 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 ENTPD7Q9NQZ7 604 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 SPATS2LQ9NUQ6 558 aaKnown RBP3.34□□□□□ -1.87
VPS50-216ENST00000484954 ANKRD10Q9NXR5 420 aa3.34□□□□□ -1.87
VPS50-216ENST00000484954 hCG_1642624A0A1W2PR95 340 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 PABPN1LA6NDY0 278 aaKnown RBP3.33□□□□□ -1.88
VPS50-216ENST00000484954 PRAC2D3DTV9 90 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 TULP2O00295 520 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 CEP104O60308 925 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 RGS11O94810 467 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 UMODP07911 640 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 CHRM4P08173 479 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 CNPP09543 421 aaKnown RBP3.33□□□□□ -1.88
VPS50-216ENST00000484954 WEE2P0C1S8 567 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 DHRS4L1P0CG22 281 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 TFPIP10646 304 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 MYF6P23409 242 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 RYKP34925 604 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 LIFRP42702 1097 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 GRK6P43250 576 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 POU5F1BQ06416 359 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 ST3GAL1Q11201 340 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 PDCD2Q16342 344 aaPredicted RBP3.33□□□□□ -1.88
VPS50-216ENST00000484954 WBP2NLQ6ICG8 309 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 C17orf99Q6UX52 265 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 MEX3BQ6ZN04 569 aaKnown RBP3.33□□□□□ -1.88
VPS50-216ENST00000484954 PRSS45Q7RTY3 260 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 TMPRSS12Q86WS5 348 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 C2CD5Q86YS7 1000 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 NR4A3Q92570 626 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 STAMQ92783 540 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 WBP1Q96G27 269 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 DUX5Q96PT3 197 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 NODALQ96S42 347 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 RASSF1Q9NS23 344 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 SLC9A2Q9UBY0 812 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 NDRG3Q9UGV2 375 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 GDAQ9Y2T3 454 aa3.33□□□□□ -1.88
VPS50-216ENST00000484954 SAA2-SAA4A0A096LPE2 208 aa3.32□□□□□ -1.88
VPS50-216ENST00000484954 hDV102S1A0JD36 115 aa3.32□□□□□ -1.88
VPS50-216ENST00000484954 SH2D7A6NKC9 451 aaPredicted RBP3.32□□□□□ -1.88
VPS50-216ENST00000484954 HSPB2A8KAH6 182 aa3.32□□□□□ -1.88
VPS50-216ENST00000484954 EBAG9O00559 213 aa3.32□□□□□ -1.88
VPS50-216ENST00000484954 HSPA12AO43301 675 aa3.32□□□□□ -1.88
VPS50-216ENST00000484954 ANP32CO43423 234 aa3.32□□□□□ -1.88
VPS50-216ENST00000484954 KDM4BO94953 1096 aa3.32□□□□□ -1.88
VPS50-216ENST00000484954 LDHAP00338 332 aaKnown RBP3.32□□□□□ -1.88
VPS50-216ENST00000484954 IGHV4-30-4P0DP06 118 aa3.32□□□□□ -1.88
VPS50-216ENST00000484954 DAOP14920 347 aa3.32□□□□□ -1.88
VPS50-216ENST00000484954 ITGAXP20702 1163 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms