RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 TMCC1O94876 653 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 PAPSS2O95340 614 aaPredicted RBP16.87■□□□□ 0.29
CTSA-207ENST00000484855 TOP3BO95985 862 aaKnown RBP16.87■□□□□ 0.29
CTSA-207ENST00000484855 CR2P20023 1033 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 DDX6P26196 483 aaKnown RBP eCLIP16.87■□□□□ 0.294e-8■■■□□ 17.6
CTSA-207ENST00000484855 AVPR1AP37288 418 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 ITIH4Q14624 930 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 TEAD2Q15562 447 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 UGP2Q16851 508 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 SPATA21Q7Z572 469 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 CMC1Q7Z7K0 106 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 RNF135Q8IUD6 432 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 PTPRN2Q92932 1015 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 GRAMD1AQ96CP6 724 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 FAM167BQ9BTA0 163 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 MCMBPQ9BTE3 642 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 SLCO1B3Q9NPD5 702 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 PHTF1Q9UMS5 762 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 MTO1Q9Y2Z2 717 aaKnown RBP16.87■□□□□ 0.29
CTSA-207ENST00000484855 ATG2AQ2TAZ0 1938 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 GRXCR1A8MXD5 290 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 CLASP2O75122 1294 aaKnown RBP16.86■□□□□ 0.29
CTSA-207ENST00000484855 ZMPSTE24O75844 475 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 RHOP08100 348 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 NEFHP12036 1026 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 HOXA9P31269 272 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 IFT88Q13099 833 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 MPPE1Q53F39 396 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 ARHGAP15Q53QZ3 475 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 CGB2Q6NT52 195 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 C6orf89Q6UWU4 347 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 TPGS1Q6ZTW0 290 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 NLRP9Q7RTR0 991 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 SH3RF2Q8TEC5 729 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 RHOJQ9H4E5 214 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 MANSC1Q9H8J5 431 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 DNMT3BQ9UBC3 853 aaKnown RBP16.86■□□□□ 0.29
CTSA-207ENST00000484855 USP15Q9Y4E8 981 aaPredicted RBP16.86■□□□□ 0.29
CTSA-207ENST00000484855 OR51B4Q9Y5P0 310 aa16.86■□□□□ 0.29
CTSA-207ENST00000484855 ATXN2Q99700 1313 aaKnown RBP16.85■□□□□ 0.29
CTSA-207ENST00000484855 EDF1O60869 148 aaKnown RBP16.85■□□□□ 0.29
CTSA-207ENST00000484855 NDST3O95803 873 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 CD160O95971 181 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 CA3P07451 260 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 CES1P23141 567 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 MAGEA12P43365 314 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 ZC3HC1Q86WB0 502 aaKnown RBP16.85■□□□□ 0.29
CTSA-207ENST00000484855 DENND6AQ8IWF6 608 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 DCAF4L2Q8NA75 395 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 BLOC1S5Q8TDH9 187 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 NUDCD1Q96RS6 583 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 TRIB3Q96RU7 358 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 PLK2Q9NYY3 685 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 DCDC2Q9UHG0 476 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 VPS51Q9UID3 782 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 GGT7Q9UJ14 662 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 CCL26Q9Y258 94 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 MYOFQ9NZM1 2061 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 MROH6A6NGR9 719 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 SIN3BO75182 1162 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 XYLBO75191 536 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 KIAA0754O94854 1291 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 SLC1A2P43004 574 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 MPP1Q00013 466 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 MPP7Q5T2T1 576 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 ZNF470Q6ECI4 717 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 KYAT3Q6YP21 454 aaKnown RBP16.85■□□□□ 0.29
CTSA-207ENST00000484855 CMTM8Q8IZV2 173 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 OR13J1Q8NGT2 312 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 GPR22Q99680 433 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 STARD13Q9Y3M8 1113 aa16.85■□□□□ 0.29
CTSA-207ENST00000484855 E2F8A0AVK6 867 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 MOSPD3O75425 235 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 PRKCGP05129 697 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 HNRNPA1P09651 372 aaKnown RBP eCLIP16.84■□□□□ 0.29
CTSA-207ENST00000484855 BGNP21810 368 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 HADHAP40939 763 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 CTBP1Q13363 440 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 LAMB3Q13751 1172 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 GRM3Q14832 879 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 INO80DQ53TQ3 878 aaPredicted RBP16.84■□□□□ 0.29
CTSA-207ENST00000484855 PPM1JQ5JR12 505 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 C9orf50Q5SZB4 431 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 N4BP2L1Q5TBK1 243 aaPredicted RBP16.84■□□□□ 0.29
CTSA-207ENST00000484855 FAM109BQ6ICB4 259 aaPredicted RBP16.84■□□□□ 0.29
CTSA-207ENST00000484855 CCDC63Q8NA47 563 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 C2CD4AQ8NCU7 369 aaPredicted RBP16.84■□□□□ 0.29
CTSA-207ENST00000484855 GABPB2Q8TAK5 448 aaPredicted RBP16.84■□□□□ 0.29
CTSA-207ENST00000484855 CALML6Q8TD86 181 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 ALG14Q96F25 216 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 NSMCE3Q96MG7 304 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 C2orf49Q9BVC5 232 aaPredicted RBP16.84■□□□□ 0.29
CTSA-207ENST00000484855 TDRD1Q9BXT4 1180 aaKnown RBP16.84■□□□□ 0.29
CTSA-207ENST00000484855 TASP1Q9H6P5 420 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 CAB39LQ9H9S4 337 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.84■□□□□ 0.29
CTSA-207ENST00000484855 CHKBQ9Y259 395 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 LDB2O43679 373 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 AHSGP02765 367 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 CYBBP04839 570 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms