RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 COG5Q9UP83 839 aa6.99□□□□□ -1.29
UBR3-210ENST00000484596 CAMK2AQ9UQM7 478 aa6.99□□□□□ -1.29
UBR3-210ENST00000484596 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.99□□□□□ -1.29
UBR3-210ENST00000484596 TTLL3Q9Y4R7 772 aa6.99□□□□□ -1.29
UBR3-210ENST00000484596 FANCD2Q9BXW9 1451 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 PABPN1LA6NDY0 278 aaKnown RBP6.98□□□□□ -1.29
UBR3-210ENST00000484596 A6NNC1 897 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 DOK2O60496 412 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 PTPN2P17706 415 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 TBXAS1P24557 533 aaPredicted RBP6.98□□□□□ -1.29
UBR3-210ENST00000484596 FMO4P31512 558 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 CENPAP49450 140 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 TWIST1Q15672 202 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 CCNG2Q16589 344 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 ZNF260Q3ZCT1 412 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 UBAP2Q5T6F2 1119 aaKnown RBP6.98□□□□□ -1.29
UBR3-210ENST00000484596 ATG9BQ674R7 924 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 ATF7IPQ6VMQ6 1270 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 FAM83HQ6ZRV2 1179 aaPredicted RBP6.98□□□□□ -1.29
UBR3-210ENST00000484596 CPLX4Q7Z7G2 160 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 PIP4P1Q86T03 277 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 TRIM74Q86UV6 250 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 TRIM73Q86UV7 250 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 FAM160B2Q86V87 743 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 DIS3L2Q8IYB7 885 aaKnown RBP6.98□□□□□ -1.29
UBR3-210ENST00000484596 OR8H2Q8N162 312 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 NGEFQ8N5V2 710 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 NRACQ8N912 160 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 GDPD5Q8WTR4 605 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 TTYH1Q9H313 450 aaPredicted RBP6.98□□□□□ -1.29
UBR3-210ENST00000484596 KIAA1456Q9P272 454 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 SARDHQ9UL12 918 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 NAALADL1Q9UQQ1 740 aa6.98□□□□□ -1.29
UBR3-210ENST00000484596 TEX13CA0A0J9YWL9 993 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 A0A1W2PPC1 479 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 DDTLA6NHG4 134 aaPredicted RBP6.97□□□□□ -1.29
UBR3-210ENST00000484596 TTC36A6NLP5 189 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 SOCS2O14508 198 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 HSPB6O14558 160 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 TMCC2O75069 709 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 SCGB1D1O95968 90 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 HSPA1AP0DMV8 641 aaKnown RBP6.97□□□□□ -1.29
UBR3-210ENST00000484596 HSPA1BP0DMV9 641 aaKnown RBP6.97□□□□□ -1.29
UBR3-210ENST00000484596 PRF1P14222 555 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 SLC2A4P14672 509 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 ZNF8P17098 575 aaPredicted RBP6.97□□□□□ -1.29
UBR3-210ENST00000484596 ABCD1P33897 745 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 RAD52P43351 418 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 TAF11Q15544 211 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 ZNF667Q5HYK9 610 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 Q5PR19 223 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 SERTAD4-AS1Q5TG53 156 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 CCDC129Q6ZRS4 1044 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 HORMAD2Q8N7B1 307 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 PLD5Q8N7P1 536 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 KCNG4Q8TDN1 519 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 LPAR1Q92633 364 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 ATOH1Q92858 354 aaPredicted RBP6.97□□□□□ -1.29
UBR3-210ENST00000484596 RSF1Q96T23 1441 aaPredicted RBP6.97□□□□□ -1.29
UBR3-210ENST00000484596 MPHOSPH8Q99549 860 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 MAP6D1Q9H9H5 199 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 SMYD2Q9NRG4 433 aa6.97□□□□□ -1.29
UBR3-210ENST00000484596 BCCIPQ9P287 314 aaKnown RBP eCLIP6.97□□□□□ -1.29
UBR3-210ENST00000484596 EBAG9O00559 213 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 NDUFB8O95169 186 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 GALTP07902 379 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 IRF1P10914 325 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 PCNAP12004 261 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 POU1F1P28069 291 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 EPHA8P29322 1005 aaPredicted RBP6.96□□□□□ -1.3
UBR3-210ENST00000484596 RASSF2P50749 326 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 EIF3BP55884 814 aaKnown RBP6.96□□□□□ -1.3
UBR3-210ENST00000484596 SLC18A2Q05940 514 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 FHL1Q13642 323 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 EIF4A2Q14240 407 aaKnown RBP6.96□□□□□ -1.3
UBR3-210ENST00000484596 TBCEQ15813 527 aaPredicted RBP6.96□□□□□ -1.3
UBR3-210ENST00000484596 ASPHD1Q5U4P2 390 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 HEPHL1Q6MZM0 1159 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 PARM1Q6UWI2 310 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 KLHL29Q96CT2 875 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 RNF183Q96D59 192 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 CENPOQ9BU64 300 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 USP44Q9H0E7 712 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 SLC25A18Q9H1K4 315 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 GHITMQ9H3K2 345 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 SPATS2LQ9NUQ6 558 aaKnown RBP6.96□□□□□ -1.3
UBR3-210ENST00000484596 POT1Q9NUX5 634 aa6.96□□□□□ -1.3
UBR3-210ENST00000484596 PLEKHB1Q9UF11 243 aaPredicted RBP6.96□□□□□ -1.3
UBR3-210ENST00000484596 RIMBP3CA6NJZ7 1639 aa6.95□□□□□ -1.3
UBR3-210ENST00000484596 RIMBP3BA6NNM3 1639 aa6.95□□□□□ -1.3
UBR3-210ENST00000484596 RIMBP3Q9UFD9 1639 aa6.95□□□□□ -1.3
UBR3-210ENST00000484596 IGLV5-39A0A0G2JS06 123 aa6.95□□□□□ -1.3
UBR3-210ENST00000484596 STMND1H3BQB6 276 aa6.95□□□□□ -1.3
UBR3-210ENST00000484596 IKBKBO14920 756 aa6.95□□□□□ -1.3
UBR3-210ENST00000484596 PTP4A3O75365 173 aa6.95□□□□□ -1.3
UBR3-210ENST00000484596 EPN2O95208 641 aa6.95□□□□□ -1.3
UBR3-210ENST00000484596 SYF2O95926 243 aaKnown RBP6.95□□□□□ -1.3
UBR3-210ENST00000484596 UBL4AP11441 157 aa6.95□□□□□ -1.3
UBR3-210ENST00000484596 ALOX12P18054 663 aa6.95□□□□□ -1.3
UBR3-210ENST00000484596 PSMA4P25789 261 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms