RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 K7ESM1 405 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 EEF2KO00418 725 aaKnown RBP9.54□□□□□ -0.88
NUP50-215ENST00000484186 INSIG1O15503 277 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 DAPK3O43293 454 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 ATMINO43313 823 aaPredicted RBP9.54□□□□□ -0.88
NUP50-215ENST00000484186 RNF8O76064 485 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 MT-CO3P00414 261 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 FTLP02792 175 aaPredicted RBP9.54□□□□□ -0.88
NUP50-215ENST00000484186 NME1P15531 152 aaKnown RBP9.54□□□□□ -0.88
NUP50-215ENST00000484186 JUNDP17535 347 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 ITIH2P19823 946 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 XPAP23025 273 aaPredicted RBP9.54□□□□□ -0.88
NUP50-215ENST00000484186 PRKCIP41743 596 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 ZNF165P49910 485 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 DUSP3P51452 185 aaPredicted RBP9.54□□□□□ -0.88
NUP50-215ENST00000484186 SUOXP51687 545 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 YPEL5P62699 121 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 EIF2B5Q13144 721 aaKnown RBP9.54□□□□□ -0.88
NUP50-215ENST00000484186 PTK2BQ14289 1009 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 GRM3Q14832 879 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 RTP5Q14D33 572 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 CA9Q16790 459 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 TMEM52BQ4KMG9 183 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 LRRC73Q5JTD7 316 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 TPRG1LQ5T0D9 272 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 VPS36Q86VN1 386 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 DNAAF5Q86Y56 855 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 ARFGAP1Q8N6T3 406 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 DCBLD1Q8N8Z6 715 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 ZNF548Q8NEK5 533 aaPredicted RBP9.54□□□□□ -0.88
NUP50-215ENST00000484186 FNIP1Q8TF40 1166 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 BTN2A2Q8WVV5 523 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 CELF6Q96J87 481 aaKnown RBP9.54□□□□□ -0.88
NUP50-215ENST00000484186 APOLD1Q96LR9 279 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 NAP1L5Q96NT1 182 aaPredicted RBP9.54□□□□□ -0.88
NUP50-215ENST00000484186 EIF3CQ99613 913 aaKnown RBP9.54□□□□□ -0.88
NUP50-215ENST00000484186 NCAPGQ9BPX3 1015 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 C1QTNF7Q9BXJ2 289 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 SLC39A8Q9C0K1 460 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 SUV39H2Q9H5I1 410 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 PDFQ9HBH1 243 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 USP29Q9HBJ7 922 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 EVA1BQ9NVM1 165 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 LHX3Q9UBR4 397 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 PCSK1NQ9UHG2 260 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 KLF15Q9UIH9 416 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 CLCA2Q9UQC9 943 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 URB1O60287 2271 aaKnown RBP9.54□□□□□ -0.88
NUP50-215ENST00000484186 ADAMTS20P59510 1910 aa9.54□□□□□ -0.88
NUP50-215ENST00000484186 TDRD6O60522 2096 aaKnown RBP9.54□□□□□ -0.88
NUP50-215ENST00000484186 ACACAQ13085 2346 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 LY6G6EA0A0G2JKS1 128 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 ARHGAP42A6NI28 874 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 DDX3XO00571 662 aaKnown RBP eCLIP9.53□□□□□ -0.88
NUP50-215ENST00000484186 TOR1BO14657 336 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 AQP9O43315 295 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 BUB1BO60566 1050 aaPredicted RBP9.53□□□□□ -0.88
NUP50-215ENST00000484186 PRAMEF11O60813 436 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 NEBLO76041 1014 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 PIGNO95427 931 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 GP1BAP07359 652 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 MYF5P13349 255 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 ERCC2P18074 760 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 MIPP30301 263 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 IGFALSP35858 605 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 CSNK1DP48730 415 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 PAPOLAP51003 745 aaKnown RBP9.53□□□□□ -0.88
NUP50-215ENST00000484186 THOP1P52888 689 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 SEMG2Q02383 582 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 KLHL30Q0D2K2 578 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 ELP6Q0PNE2 266 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 NR1I3Q14994 352 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 IQCB1Q15051 598 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 UGP2Q16851 508 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 KLHL40Q2TBA0 621 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 E4F1Q66K89 784 aaPredicted RBP9.53□□□□□ -0.88
NUP50-215ENST00000484186 CAVIN1Q6NZI2 390 aaKnown RBP9.53□□□□□ -0.88
NUP50-215ENST00000484186 ZCCHC8Q6NZY4 707 aaKnown RBP9.53□□□□□ -0.88
NUP50-215ENST00000484186 KDM7AQ6ZMT4 941 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 RFX8Q6ZV50 586 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 PDZD3Q86UT5 571 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 PSTKQ8IV42 348 aaKnown RBP9.53□□□□□ -0.88
NUP50-215ENST00000484186 TP53I13Q8NBR0 393 aaPredicted RBP9.53□□□□□ -0.88
NUP50-215ENST00000484186 LMX1AQ8TE12 382 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 EXOC2Q96KP1 924 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 ZNF641Q96N77 438 aaPredicted RBP9.53□□□□□ -0.88
NUP50-215ENST00000484186 PEBP4Q96S96 227 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 KCTD15Q96SI1 283 aaPredicted RBP9.53□□□□□ -0.88
NUP50-215ENST00000484186 WRAP53Q9BUR4 548 aaKnown RBP9.53□□□□□ -0.88
NUP50-215ENST00000484186 SNRNP25Q9BV90 132 aaKnown RBP9.53□□□□□ -0.88
NUP50-215ENST00000484186 EDEM3Q9BZQ6 932 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 MBNL1Q9NR56 388 aaKnown RBP9.53□□□□□ -0.88
NUP50-215ENST00000484186 SPASTQ9UBP0 616 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 CNOT8Q9UFF9 292 aaKnown RBP9.53□□□□□ -0.88
NUP50-215ENST00000484186 SALL4Q9UJQ4 1053 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 U3KQA8 63 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 APC2O95996 2303 aa9.53□□□□□ -0.88
NUP50-215ENST00000484186 LAMA5O15230 3695 aa9.52□□□□□ -0.88
NUP50-215ENST00000484186 TSPAN11A1L157 253 aa9.52□□□□□ -0.89
NUP50-215ENST00000484186 RIOK3O14730 519 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms