RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 CIPCQ9C0C6 399 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 OSBPL2Q9H1P3 480 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 EPB41L4BQ9H329 900 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 CATSPERBQ9H7T0 1116 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 C10orf88Q9H8K7 445 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 VPS37BQ9H9H4 285 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 USP29Q9HBJ7 922 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 OLA1Q9NTK5 396 aaKnown RBP7.05□□□□□ -1.28
BRCA1-216ENST00000484087 ABCB8Q9NUT2 735 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 ETNK2Q9NVF9 386 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 DTLQ9NZJ0 730 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-216ENST00000484087 NCDNQ9UBB6 729 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 HBS1LQ9Y450 684 aaKnown RBP7.05□□□□□ -1.28
BRCA1-216ENST00000484087 PLXND1Q9Y4D7 1925 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 PCDHGA2Q9Y5H1 932 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 EXOC1LA0A1B0GW35 172 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 A0A1W2PQF6 199 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 GOLGA8MH3BSY2 632 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 GFRA2O00451 464 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 AXIN1O15169 862 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 FGF10O15520 208 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 OPHN1O60890 802 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 TCEA3O75764 348 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 RPP40O75818 363 aaKnown RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 PAPSS2O95340 614 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 IGLV3-25P01717 112 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 APOEP02649 317 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 ERCC2P18074 760 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 GABRG2P18507 467 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 EPHB2P29323 1055 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 EIF2DP41214 584 aaKnown RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 CTSOP43234 321 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 SLCO1A2P46721 670 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 ATP1A2P50993 1020 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 GNGT1P63211 74 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 CDK16Q00536 496 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 DPYSQ14117 519 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 PPP2R5DQ14738 602 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 KLHL38Q2WGJ6 581 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 BBS9Q3SYG4 887 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 FUT11Q495W5 492 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 FBXO43Q4G163 708 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 SWT1Q5T5J6 900 aaKnown RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 ACBD5Q5T8D3 534 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 PIK3R6Q5UE93 754 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 TCEAL6Q6IPX3 200 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 CEP68Q76N32 757 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 C14orf80Q86SX3 495 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 WDR5BQ86VZ2 330 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 CHSY1Q86X52 802 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 CHPFQ8IZ52 775 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 LGI2Q8N0V4 545 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 PGBD3Q8N328 593 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 SYNPOQ8N3V7 929 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 CARNMT1Q8N4J0 409 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 ZNF276Q8N554 614 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 LZTR1Q8N653 840 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 MCUQ8NE86 351 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 OR52K2Q8NGK3 314 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 EPS8L3Q8TE67 593 aaKnown RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 TCEAL3Q969E4 200 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 ACDQ96AP0 544 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 LRRC39Q96DD0 335 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 SLC39A13Q96H72 371 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 OLFM3Q96PB7 478 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 XPO6Q96QU8 1125 aaKnown RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 IRF2BPLQ9H1B7 796 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 FSCN3Q9NQT6 498 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 RXFP3Q9NSD7 469 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 ARHGEF38Q9NXL2 777 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 OR12D3Q9UGF7 316 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 PTPRZ1P23471 2315 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 TP53BP1Q12888 1972 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 DOCK4Q8N1I0 1966 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 WDFY3Q8IZQ1 3526 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 CEP250Q9BV73 2442 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 A0A0A0MRY4 1105 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 E7ESA3 106 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 MFSD11O43934 449 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 GDF9O60383 454 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 MAP3K6O95382 1288 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 APBB3O95704 486 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 APRTP07741 180 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 TPSB2P20231 275 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 TACR2P21452 398 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 MDH1P40925 334 aaKnown RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 ZNF33AQ06730 810 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 LMAN2Q12907 356 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 ZNF234Q14588 700 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 KCNJ11Q14654 390 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 SF3A2Q15428 464 aaKnown RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 TPSAB1Q15661 275 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 LONRF1Q17RB8 773 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 CCDC38Q502W7 563 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 MS4A13Q5J8X5 152 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 ANKRD20A2Q5SQ80 823 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 ADGRF1Q5T601 910 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms