RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 NEU3Q9UQ49 428 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 CTNND2Q9UQB3 1225 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 AHCTF1Q8WYP5 2266 aa13.07□□□□□ -0.32
UBR4-213ENST00000483922 D6RAR5 112 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 RIOK3O14730 519 aaKnown RBP13.06□□□□□ -0.32
UBR4-213ENST00000483922 ITGB2P05107 769 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 UGT2B4P06133 528 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 TIMP2P16035 220 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 PON1P27169 355 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 GABRB2P47870 512 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 RPIAP49247 311 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 ARSDP51689 593 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 THOP1P52888 689 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 INHBCP55103 352 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 ZFP36L1Q07352 338 aaKnown RBP13.06□□□□□ -0.32
UBR4-213ENST00000483922 ALG11Q2TAA5 492 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 KLHL40Q2TBA0 621 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 MYLK3Q32MK0 819 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 SLC25A52Q3SY17 297 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 ATXN7L2Q5T6C5 722 aaPredicted RBP13.06□□□□□ -0.32
UBR4-213ENST00000483922 ZNF783Q6ZMS7 281 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 MACC1Q6ZN28 852 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 ENOSF1Q7L5Y1 443 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 DTX1Q86Y01 620 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 XYLT1Q86Y38 959 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 IRF2BP1Q8IU81 584 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 DRC7Q8IY82 874 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 PCDH19Q8TAB3 1148 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 WDR48Q8TAF3 677 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 RAB7BQ96AH8 199 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 HAPLN3Q96S86 360 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 SEMA3CQ99985 751 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 ZYG11BQ9C0D3 744 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 LRRN3Q9H3W5 708 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 APEX2Q9UBZ4 518 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 TMEM59LQ9UK28 342 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 COQ6Q9Y2Z9 468 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 PCDHGA4Q9Y5G9 962 aa13.06□□□□□ -0.32
UBR4-213ENST00000483922 PRAMEF33A0A0G2JMD5 474 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 C9orf172C9J069 976 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 KRIT1O00522 736 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 NVLO15381 856 aaKnown RBP13.05□□□□□ -0.32
UBR4-213ENST00000483922 PRAMEF10O60809 474 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 F9P00740 461 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 RPLP0P05388 317 aaKnown RBP13.05□□□□□ -0.32
UBR4-213ENST00000483922 CCKBRP32239 447 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 CDH5P33151 784 aaPredicted RBP13.05□□□□□ -0.32
UBR4-213ENST00000483922 HK3P52790 923 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 PPARDQ03181 441 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 PTK2BQ14289 1009 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 IRF4Q15306 451 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 WSCD2Q2TBF2 565 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 MANEALQ5VSG8 457 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 ESRP1Q6NXG1 681 aaKnown RBP13.05□□□□□ -0.32
UBR4-213ENST00000483922 XKR5Q6UX68 686 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 ATG14Q6ZNE5 492 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 TTC7BQ86TV6 843 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 NLRP14Q86W24 1093 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 FAM131BQ86XD5 332 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 JAMLQ86YT9 394 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 ARL10Q8N8L6 244 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 GPR156Q8NFN8 814 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 OR2AP1Q8NGE2 309 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 GLMNQ92990 594 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 CFAP57Q96MR6 1250 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 GFM1Q96RP9 751 aaKnown RBP13.05□□□□□ -0.32
UBR4-213ENST00000483922 EPAS1Q99814 870 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 FUCA2Q9BTY2 467 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 CPEB1Q9BZB8 566 aaKnown RBP13.05□□□□□ -0.32
UBR4-213ENST00000483922 EDEM3Q9BZQ6 932 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 SLC13A1Q9BZW2 595 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 KLC2Q9H0B6 622 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 RRN3Q9NYV6 651 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 PPARGC1AQ9UBK2 798 aaKnown RBP13.05□□□□□ -0.32
UBR4-213ENST00000483922 PISDQ9UG56 409 aa13.05□□□□□ -0.32
UBR4-213ENST00000483922 HEMK1Q9Y5R4 338 aaPredicted RBP13.05□□□□□ -0.32
UBR4-213ENST00000483922 CHD5Q8TDI0 1954 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 BIN1O00499 593 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 NEMP1O14524 444 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 INSIG1O15503 277 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 TM7SF2O76062 418 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 GSRP00390 522 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 LIPCP11150 499 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 STIM1Q13586 685 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 OGFOD3Q6PK18 319 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 GDPD4Q6W3E5 623 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 ZSCAN30Q86W11 494 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 HID1Q8IV36 788 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 ELOA2Q8IYF1 753 aaPredicted RBP13.04□□□□□ -0.32
UBR4-213ENST00000483922 RYBPQ8N488 228 aaPredicted RBP13.04□□□□□ -0.32
UBR4-213ENST00000483922 Q8N9G6 341 aaPredicted RBP13.04□□□□□ -0.32
UBR4-213ENST00000483922 USP7Q93009 1102 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 CCDC34Q96HJ3 373 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 WRAP53Q9BUR4 548 aaKnown RBP13.04□□□□□ -0.32
UBR4-213ENST00000483922 NOL6Q9H6R4 1146 aaKnown RBP13.04□□□□□ -0.32
UBR4-213ENST00000483922 DNAI1Q9UI46 699 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 DNAJC12Q9UKB3 198 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 LOXL2Q9Y4K0 774 aa13.04□□□□□ -0.32
UBR4-213ENST00000483922 POP4O95707 220 aaKnown RBP13.03□□□□□ -0.32
UBR4-213ENST00000483922 GNA14O95837 355 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms