RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 ARHGAP42A6NI28 874 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 TMCO5BA8MYB1 307 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 EEF2KO00418 725 aaKnown RBP20.09■□□□□ 0.81
HPS4-213ENST00000483631 PRAMEF11O60813 436 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 FTLP02792 175 aaPredicted RBP20.09■□□□□ 0.81
HPS4-213ENST00000483631 CKMT1AP12532 417 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 CSNK1DP48730 415 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 HCAR3P49019 387 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 YPEL5P62699 121 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 CYP4F3Q08477 520 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 KLHL30Q0D2K2 578 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 ELP6Q0PNE2 266 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 NR1I3Q14994 352 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 ACAP1Q15027 740 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 IQCB1Q15051 598 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 CAVIN1Q6NZI2 390 aaKnown RBP20.09■□□□□ 0.81
HPS4-213ENST00000483631 CENPTQ96BT3 561 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 TBATAQ96M53 351 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 MRPL47Q9HD33 250 aaKnown RBP20.09■□□□□ 0.81
HPS4-213ENST00000483631 UCKL1Q9NWZ5 548 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 DNAJC28Q9NX36 388 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 NCKIPSDQ9NZQ3 722 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 LHX3Q9UBR4 397 aa20.09■□□□□ 0.81
HPS4-213ENST00000483631 PRPSAP2O60256 369 aa20.08■□□□□ 0.81
HPS4-213ENST00000483631 TM7SF2O76062 418 aa20.08■□□□□ 0.81
HPS4-213ENST00000483631 GP1BAP07359 652 aa20.08■□□□□ 0.81
HPS4-213ENST00000483631 DUSP3P51452 185 aaPredicted RBP20.08■□□□□ 0.81
HPS4-213ENST00000483631 DAB2P98082 770 aa20.08■□□□□ 0.81
HPS4-213ENST00000483631 PTK2BQ14289 1009 aa20.08■□□□□ 0.81
HPS4-213ENST00000483631 CYTH1Q15438 398 aa20.08■□□□□ 0.81
HPS4-213ENST00000483631 TMEM52BQ4KMG9 183 aa20.08■□□□□ 0.81
HPS4-213ENST00000483631 MARCH9Q86YJ5 346 aa20.08■□□□□ 0.81
HPS4-213ENST00000483631 ARFGAP1Q8N6T3 406 aa20.08■□□□□ 0.81
HPS4-213ENST00000483631 CXorf40AQ8TE69 158 aa20.08■□□□□ 0.81
HPS4-213ENST00000483631 BTN2A2Q8WVV5 523 aa20.08■□□□□ 0.81
HPS4-213ENST00000483631 ZNF641Q96N77 438 aaPredicted RBP20.08■□□□□ 0.81
HPS4-213ENST00000483631 NAP1L5Q96NT1 182 aaPredicted RBP20.08■□□□□ 0.81
HPS4-213ENST00000483631 TUBGCP5Q96RT8 1024 aa20.08■□□□□ 0.81
HPS4-213ENST00000483631 SNRNP25Q9BV90 132 aaKnown RBP20.08■□□□□ 0.81
HPS4-213ENST00000483631 DHX35Q9H5Z1 703 aaKnown RBP20.08■□□□□ 0.81
HPS4-213ENST00000483631 CNOT8Q9UFF9 292 aaKnown RBP20.08■□□□□ 0.81
HPS4-213ENST00000483631 IPO11Q9UI26 975 aaKnown RBP20.08■□□□□ 0.81
HPS4-213ENST00000483631 GGT7Q9UJ14 662 aa20.08■□□□□ 0.81
HPS4-213ENST00000483631 LHX6Q9UPM6 363 aa20.08■□□□□ 0.81
HPS4-213ENST00000483631 ITM2BQ9Y287 266 aa20.08■□□□□ 0.81
HPS4-213ENST00000483631 BZW2Q9Y6E2 419 aaKnown RBP20.08■□□□□ 0.81
HPS4-213ENST00000483631 LRRK1Q38SD2 2015 aa20.07■□□□□ 0.8
HPS4-213ENST00000483631 DDX3XO00571 662 aaKnown RBP eCLIP20.07■□□□□ 0.89e-7■■■□□ 14.6
HPS4-213ENST00000483631 TIMP2P16035 220 aa20.07■□□□□ 0.8
HPS4-213ENST00000483631 PCK1P35558 622 aa20.07■□□□□ 0.8
HPS4-213ENST00000483631 TARDBPQ13148 414 aaKnown RBP eCLIP20.07■□□□□ 0.8
HPS4-213ENST00000483631 PDE1CQ14123 709 aaPredicted RBP20.07■□□□□ 0.8
HPS4-213ENST00000483631 RFTN1Q14699 578 aaPredicted RBP20.07■□□□□ 0.8
HPS4-213ENST00000483631 RTP5Q14D33 572 aa20.07■□□□□ 0.8
HPS4-213ENST00000483631 AFMIDQ63HM1 303 aa20.07■□□□□ 0.8
HPS4-213ENST00000483631 E4F1Q66K89 784 aaPredicted RBP20.07■□□□□ 0.8
HPS4-213ENST00000483631 BRAT1Q6PJG6 821 aa20.07■□□□□ 0.8
HPS4-213ENST00000483631 RFX8Q6ZV50 586 aa20.07■□□□□ 0.8
HPS4-213ENST00000483631 LZTR1Q8N653 840 aa20.07■□□□□ 0.8
HPS4-213ENST00000483631 DCBLD1Q8N8Z6 715 aa20.07■□□□□ 0.8
HPS4-213ENST00000483631 ZNF548Q8NEK5 533 aaPredicted RBP20.07■□□□□ 0.8
HPS4-213ENST00000483631 SYN2Q92777 582 aaPredicted RBP20.07■□□□□ 0.8
HPS4-213ENST00000483631 IQCDQ96DY2 449 aa20.07■□□□□ 0.8
HPS4-213ENST00000483631 ISCUQ9H1K1 167 aa20.07■□□□□ 0.8
HPS4-213ENST00000483631 SUV39H2Q9H5I1 410 aa20.07■□□□□ 0.8
HPS4-213ENST00000483631 CLCA2Q9UQC9 943 aa20.07■□□□□ 0.8
HPS4-213ENST00000483631 RAXQ9Y2V3 346 aa20.07■□□□□ 0.8
HPS4-213ENST00000483631 ANKRD36A6QL64 1941 aa20.07■□□□□ 0.8
HPS4-213ENST00000483631 A0A087WV48 116 aa20.06■□□□□ 0.8
HPS4-213ENST00000483631 A0A1W2PQJ5 194 aa20.06■□□□□ 0.8
HPS4-213ENST00000483631 TPP1O14773 563 aa20.06■□□□□ 0.8
HPS4-213ENST00000483631 ATMINO43313 823 aaPredicted RBP20.06■□□□□ 0.8
HPS4-213ENST00000483631 SERPINC1P01008 464 aa20.06■□□□□ 0.8
HPS4-213ENST00000483631 MIPP30301 263 aa20.06■□□□□ 0.8
HPS4-213ENST00000483631 TPM4P67936 248 aa20.06■□□□□ 0.8
HPS4-213ENST00000483631 INSM1Q01101 510 aaPredicted RBP20.06■□□□□ 0.8
HPS4-213ENST00000483631 AGERQ15109 404 aa20.06■□□□□ 0.8
HPS4-213ENST00000483631 ZCCHC8Q6NZY4 707 aaKnown RBP20.06■□□□□ 0.8
HPS4-213ENST00000483631 ZNF653Q96CK0 615 aa20.06■□□□□ 0.8
HPS4-213ENST00000483631 APOLD1Q96LR9 279 aa20.06■□□□□ 0.8
HPS4-213ENST00000483631 PEBP4Q96S96 227 aa20.06■□□□□ 0.8
HPS4-213ENST00000483631 SLC39A8Q9C0K1 460 aa20.06■□□□□ 0.8
HPS4-213ENST00000483631 GPATCH2LQ9NWQ4 482 aa20.06■□□□□ 0.8
HPS4-213ENST00000483631 ASXL3Q9C0F0 2248 aa20.06■□□□□ 0.8
HPS4-213ENST00000483631 CFAP69A5D8W1 941 aa20.05■□□□□ 0.8
HPS4-213ENST00000483631 K7ESM1 405 aa20.05■□□□□ 0.8
HPS4-213ENST00000483631 FFAR2O15552 330 aa20.05■□□□□ 0.8
HPS4-213ENST00000483631 DAPK3O43293 454 aa20.05■□□□□ 0.8
HPS4-213ENST00000483631 LRCH4O75427 683 aa20.05■□□□□ 0.8
HPS4-213ENST00000483631 ERCC2P18074 760 aa20.05■□□□□ 0.8
HPS4-213ENST00000483631 XPAP23025 273 aaPredicted RBP20.05■□□□□ 0.8
HPS4-213ENST00000483631 PEX5P50542 639 aa20.05■□□□□ 0.8
HPS4-213ENST00000483631 PAPOLAP51003 745 aaKnown RBP20.05■□□□□ 0.8
HPS4-213ENST00000483631 THOP1P52888 689 aa20.05■□□□□ 0.8
HPS4-213ENST00000483631 NSUN2Q08J23 767 aaKnown RBP eCLIP20.05■□□□□ 0.8
HPS4-213ENST00000483631 CA9Q16790 459 aa20.05■□□□□ 0.8
HPS4-213ENST00000483631 UGP2Q16851 508 aa20.05■□□□□ 0.8
HPS4-213ENST00000483631 CYP4V2Q6ZWL3 525 aaPredicted RBP20.05■□□□□ 0.8
HPS4-213ENST00000483631 KCTD15Q96SI1 283 aaPredicted RBP20.05■□□□□ 0.8
HPS4-213ENST00000483631 PCSK1NQ9UHG2 260 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms