RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 PRAMEP78395 509 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 SMAD3P84022 425 aaKnown RBP12.03□□□□□ -0.48
SND1-210ENST00000483503 NSUN2Q08J23 767 aaKnown RBP eCLIP12.03□□□□□ -0.48
SND1-210ENST00000483503 PPIGQ13427 754 aaKnown RBP eCLIP12.03□□□□□ -0.481e-12■■□□□ 12.1
SND1-210ENST00000483503 PCLAFQ15004 111 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 TBCCQ15814 346 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 SPRED3Q2MJR0 410 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 PPM1JQ5JR12 505 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 RALGPS1Q5JS13 557 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 FAM91A1Q658Y4 838 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 MBLAC2Q68D91 279 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 ZNF470Q6ECI4 717 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 KDELC2Q7Z4H8 507 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 PGBD5Q8N414 524 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 OR7D4Q8NG98 312 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 SCG3Q8WXD2 468 aaKnown RBP12.03□□□□□ -0.48
SND1-210ENST00000483503 INPP5DQ92835 1189 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 TRIM43Q96BQ3 446 aaPredicted RBP12.03□□□□□ -0.48
SND1-210ENST00000483503 MYEOVQ96EZ4 313 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 ATXN7L3BQ96GX2 97 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 PRICKLE1Q96MT3 831 aaPredicted RBP12.03□□□□□ -0.48
SND1-210ENST00000483503 ZBP1Q9H171 429 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 MUC3BQ9H195 1237 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 ATXN3LQ9H3M9 355 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 SLC40A1Q9NP59 571 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 GKN1Q9NS71 199 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 TMEM216Q9P0N5 145 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.03□□□□□ -0.48
SND1-210ENST00000483503 HEY2Q9UBP5 337 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 GGT7Q9UJ14 662 aa12.03□□□□□ -0.48
SND1-210ENST00000483503 CHD5Q8TDI0 1954 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 CCDC78A2IDD5 438 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 C2orf78A6NCI8 922 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 TEX28O15482 410 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 TRIM13O60858 407 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 RASSF9O75901 435 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 FGF18O76093 207 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 CRTAMO95727 393 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 FGF19O95750 216 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 GSRP00390 522 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 KLKB1P03952 638 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 ADH1AP07327 375 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 ATXN1LP0C7T5 689 aaKnown RBP12.02□□□□□ -0.49
SND1-210ENST00000483503 NQO1P15559 274 aaKnown RBP12.02□□□□□ -0.49
SND1-210ENST00000483503 ARNTP27540 789 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 CDC25CP30307 473 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 SLC1A2P43004 574 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 ABCE1P61221 599 aaKnown RBP12.02□□□□□ -0.49
SND1-210ENST00000483503 IRX4P78413 519 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 ACVR1Q04771 509 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 MSLNQ13421 630 aaPredicted RBP12.02□□□□□ -0.49
SND1-210ENST00000483503 KRT72Q14CN4 511 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 SMAD1Q15797 465 aaKnown RBP12.02□□□□□ -0.49
SND1-210ENST00000483503 RNF219Q5W0B1 726 aaPredicted RBP12.02□□□□□ -0.49
SND1-210ENST00000483503 RTL10Q7L3V2 364 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 C10orf107Q8IVU9 208 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 ARID3BQ8IVW6 561 aaPredicted RBP12.02□□□□□ -0.49
SND1-210ENST00000483503 BRSK1Q8TDC3 778 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 STYXQ8WUJ0 223 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 USP13Q92995 863 aaPredicted RBP12.02□□□□□ -0.49
SND1-210ENST00000483503 ABHD8Q96I13 439 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 ELMO2Q96JJ3 720 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 NUDCD1Q96RS6 583 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 TMEM106CQ9BVX2 250 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 EMILIN2Q9BXX0 1053 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 RNF38Q9H0F5 515 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 TASP1Q9H6P5 420 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 KCNK13Q9HB14 408 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 TRPC7Q9HCX4 862 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 SCUBE2Q9NQ36 999 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.02□□□□□ -0.494e-11■■□□□ 13.7
SND1-210ENST00000483503 SLC2A6Q9UGQ3 507 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 SORCS3Q9UPU3 1222 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 INSL6Q9Y581 213 aa12.02□□□□□ -0.49
SND1-210ENST00000483503 A0A0D9SEW6 157 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 ZBBXA8MT70 800 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 H0Y626 953 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 GOLGA8TH3BQL2 631 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 INSIG1O15503 277 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 TSPAN3O60637 253 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 TBL1XO60907 577 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 RPP40O75818 363 aaKnown RBP12.01□□□□□ -0.49
SND1-210ENST00000483503 KLHL2O95198 593 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 OLFM2O95897 454 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 FGBP02675 491 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 MYL4P12829 197 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 HDCP19113 662 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 CA8P35219 290 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 SLC26A3P40879 764 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 HTRA4P83105 476 aaPredicted RBP12.01□□□□□ -0.49
SND1-210ENST00000483503 CTBP1Q13363 440 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 INO80DQ53TQ3 878 aaPredicted RBP12.01□□□□□ -0.49
SND1-210ENST00000483503 MRNIPQ6NTE8 343 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 KLC3Q6P597 504 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 ZYG11AQ6WRX3 759 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 ASRGL1Q7L266 308 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 CLNKQ7Z7G1 428 aa12.01□□□□□ -0.49
SND1-210ENST00000483503 SDCCAG8Q86SQ7 713 aaPredicted RBP12.01□□□□□ -0.49
SND1-210ENST00000483503 TBC1D1Q86TI0 1168 aaPredicted RBP12.01□□□□□ -0.49
SND1-210ENST00000483503 METTL3Q86U44 580 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms