RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ACVRL1P37023 503 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 YPEL5P62699 121 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 PPARDQ03181 441 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 PAK1Q13153 545 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 DSG2Q14126 1118 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 MORC3Q14149 939 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 EXOC3L4Q17RC7 722 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 MYLK3Q32MK0 819 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 SLC25A52Q3SY17 297 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 LRRC73Q5JTD7 316 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 ACBD5Q5T8D3 534 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-206ENST00000483030 LEKR1Q6ZMV7 388 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 GBP6Q6ZN66 633 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 RAB11FIP2Q7L804 512 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 SLC47A2Q86VL8 602 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 ZDHHC17Q8IUH5 632 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 HID1Q8IV36 788 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 PLPP6Q8IY26 295 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 ELOA2Q8IYF1 753 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-206ENST00000483030 SDR16C5Q8N3Y7 309 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 TMEM35BQ8NCS4 154 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 SCG3Q8WXD2 468 aaKnown RBP7.49□□□□□ -1.21
CSDE1-206ENST00000483030 EXTL1Q92935 676 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 TSACCQ96A04 125 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-206ENST00000483030 CCDC74AQ96AQ1 378 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 ISG20Q96AZ6 181 aaKnown RBP7.49□□□□□ -1.21
CSDE1-206ENST00000483030 C18orf8Q96DM3 657 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 SGF29Q96ES7 293 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 LIN37Q96GY3 246 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-206ENST00000483030 TBATAQ96M53 351 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 KLHL32Q96NJ5 620 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 HAPLN3Q96S86 360 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 STRADBQ9C0K7 418 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 PDCL3Q9H2J4 239 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 MBNL1Q9NR56 388 aaKnown RBP7.49□□□□□ -1.21
CSDE1-206ENST00000483030 APEX2Q9UBZ4 518 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 RABGEF1Q9UJ41 708 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 DNAJC12Q9UKB3 198 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 AJAP1Q9UKB5 411 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-206ENST00000483030 PCDHGA7Q9Y5G6 932 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 PIEZO2Q9H5I5 2752 aa7.49□□□□□ -1.21
CSDE1-206ENST00000483030 A0A1W2PQM1 296 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 GOLGA8SH3BPF8 625 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 TMX2-CTNND1H3BSU7 103 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 AREL1O15033 823 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 TM7SF2O76062 418 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 RPLP0P05388 317 aaKnown RBP7.48□□□□□ -1.21
CSDE1-206ENST00000483030 FAM87AP0C7U9 286 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 JMJD7P0C870 316 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 ITGB6P18564 788 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 FLT3P36888 993 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 HK3P52790 923 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 INHBCP55103 352 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 SNRPD1P62314 119 aaKnown RBP7.48□□□□□ -1.21
CSDE1-206ENST00000483030 FOXK1P85037 733 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 EIF3IQ13347 325 aaKnown RBP7.48□□□□□ -1.21
CSDE1-206ENST00000483030 POLD3Q15054 466 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-206ENST00000483030 ELOCQ15369 112 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 KLHL40Q2TBA0 621 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 C2CD6Q53TS8 623 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 ATXN7L2Q5T6C5 722 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-206ENST00000483030 FAM102AQ5T9C2 384 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-206ENST00000483030 TRNP1Q6NT89 227 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 RWDD4Q6NW29 188 aaKnown RBP7.48□□□□□ -1.21
CSDE1-206ENST00000483030 LVRNQ6Q4G3 990 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 XKR5Q6UX68 686 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 GDPD4Q6W3E5 623 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 MACC1Q6ZN28 852 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 ATG14Q6ZNE5 492 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 RD3Q7Z3Z2 195 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 FAM131BQ86XD5 332 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 XYLT1Q86Y38 959 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 FSTL5Q8N475 847 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-206ENST00000483030 ARL10Q8N8L6 244 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 Q8N9G6 341 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-206ENST00000483030 KYQ8NBH2 561 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 NETO2Q8NC67 525 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 OR2AP1Q8NGE2 309 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 PCDH19Q8TAB3 1148 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 CXorf40AQ8TE69 158 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 ZNF592Q92610 1267 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 VOPP1Q96AW1 172 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 ARHGEF26Q96DR7 871 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 CFAP57Q96MR6 1250 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 GFM1Q96RP9 751 aaKnown RBP7.48□□□□□ -1.21
CSDE1-206ENST00000483030 EPAS1Q99814 870 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 WRAP53Q9BUR4 548 aaKnown RBP7.48□□□□□ -1.21
CSDE1-206ENST00000483030 C1QTNF7Q9BXJ2 289 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 CPEB1Q9BZB8 566 aaKnown RBP7.48□□□□□ -1.21
CSDE1-206ENST00000483030 LRRN3Q9H3W5 708 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 STARD5Q9NSY2 213 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 NDFIP2Q9NV92 336 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 TMEM51Q9NW97 253 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 PPARGC1AQ9UBK2 798 aaKnown RBP7.48□□□□□ -1.21
CSDE1-206ENST00000483030 PISDQ9UG56 409 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 DNAI1Q9UI46 699 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 HPCAL4Q9UM19 191 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 GPR34Q9UPC5 381 aa7.48□□□□□ -1.21
CSDE1-206ENST00000483030 TDRD6O60522 2096 aaKnown RBP7.48□□□□□ -1.21
CSDE1-206ENST00000483030 D6RAR5 112 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms