RNA–Protein interactions for RNA: ENST00000482582.5

TRAIP-208, Transcript of TRAF interacting protein, humanhuman

TSL 5

Gene TRAIP, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-208ENST00000482582 ZBTB44Q8NCP5 570 aa11.92□□□□□ -0.5
TRAIP-208ENST00000482582 TMIEQ8NEW7 156 aa11.92□□□□□ -0.5
TRAIP-208ENST00000482582 SPATA22Q8NHS9 363 aa11.92□□□□□ -0.5
TRAIP-208ENST00000482582 MAGOHBQ96A72 148 aaKnown RBP11.92□□□□□ -0.5
TRAIP-208ENST00000482582 ARRDC3Q96B67 414 aa11.92□□□□□ -0.5
TRAIP-208ENST00000482582 RTP4Q96DX8 246 aa11.92□□□□□ -0.5
TRAIP-208ENST00000482582 SIPA1Q96FS4 1042 aa11.92□□□□□ -0.5
TRAIP-208ENST00000482582 CCDC114Q96M63 670 aa11.92□□□□□ -0.5
TRAIP-208ENST00000482582 NAP1L3Q99457 506 aaPredicted RBP11.92□□□□□ -0.5
TRAIP-208ENST00000482582 GORASP1Q9BQQ3 440 aa11.92□□□□□ -0.5
TRAIP-208ENST00000482582 CPEB1Q9BZB8 566 aaKnown RBP11.92□□□□□ -0.5
TRAIP-208ENST00000482582 TPSD1Q9BZJ3 242 aa11.92□□□□□ -0.5
TRAIP-208ENST00000482582 SCUBE2Q9NQ36 999 aa11.92□□□□□ -0.5
TRAIP-208ENST00000482582 SERGEFQ9UGK8 458 aa11.92□□□□□ -0.5
TRAIP-208ENST00000482582 AMACRQ9UHK6 382 aa11.92□□□□□ -0.5
TRAIP-208ENST00000482582 RALYQ9UKM9 306 aaKnown RBP11.92□□□□□ -0.5
TRAIP-208ENST00000482582 ZNF148Q9UQR1 794 aa11.92□□□□□ -0.5
TRAIP-208ENST00000482582 FARP1Q9Y4F1 1045 aaPredicted RBP11.92□□□□□ -0.5
TRAIP-208ENST00000482582 PCDHGC4Q9Y5F7 938 aa11.92□□□□□ -0.5
TRAIP-208ENST00000482582 CHD8Q9HCK8 2581 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 LRRK1Q38SD2 2015 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 TRPM6Q9BX84 2022 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 KPNA3O00505 521 aaPredicted RBP11.91□□□□□ -0.5
TRAIP-208ENST00000482582 ZNF500O60304 480 aaPredicted RBP11.91□□□□□ -0.5
TRAIP-208ENST00000482582 GCATO75600 419 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 NEBLO76041 1014 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 UGT2B4P06133 528 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 ZSCAN5DPP0CG00 497 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 HOXA6P31267 233 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 DRD3P35462 400 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 COILP38432 576 aaPredicted RBP11.91□□□□□ -0.5
TRAIP-208ENST00000482582 FNTBP49356 437 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 SKOR1P84550 965 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 TRAF2Q12933 501 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 ZSWIM9Q86XI8 627 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 PGBD3Q8N328 593 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 RLN3Q8WXF3 142 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 PRCCQ92733 491 aaPredicted RBP11.91□□□□□ -0.5
TRAIP-208ENST00000482582 TADA1Q96BN2 335 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 IMP4Q96G21 291 aaKnown RBP11.91□□□□□ -0.5
TRAIP-208ENST00000482582 SPATA13Q96N96 652 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 KLHL32Q96NJ5 620 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 RBM15Q96T37 977 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRAIP-208ENST00000482582 VAT1Q99536 393 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 POLR1EQ9GZS1 481 aaKnown RBP11.91□□□□□ -0.5
TRAIP-208ENST00000482582 DDX47Q9H0S4 455 aaKnown RBP11.91□□□□□ -0.5
TRAIP-208ENST00000482582 SLC25A51Q9H1U9 297 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 PABPC3Q9H361 631 aaKnown RBP11.91□□□□□ -0.5
TRAIP-208ENST00000482582 FBRSQ9HAH7 460 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 HOMER3Q9NSC5 361 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 BCCIPQ9P287 314 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRAIP-208ENST00000482582 KLHL8Q9P2G9 620 aaPredicted RBP11.91□□□□□ -0.5
TRAIP-208ENST00000482582 RNF14Q9UBS8 474 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 CDC23Q9UJX2 597 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 INVSQ9Y283 1065 aa11.91□□□□□ -0.5
TRAIP-208ENST00000482582 THADAQ6YHU6 1953 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 A0A1W2PP55 124 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 CFAP69A5D8W1 941 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 TRAFD1O14545 582 aaPredicted RBP11.9□□□□□ -0.5
TRAIP-208ENST00000482582 RNASEH1O60930 286 aaKnown RBP11.9□□□□□ -0.5
TRAIP-208ENST00000482582 PHF2O75151 1096 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 ALDH1A2O94788 518 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 METTL18O95568 372 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 MT-CYBP00156 380 aaPredicted RBP11.9□□□□□ -0.5
TRAIP-208ENST00000482582 IFNB1P01574 187 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 PRNPP04156 253 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 PSMB4P28070 264 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 STIP1P31948 543 aaKnown RBP11.9□□□□□ -0.5
TRAIP-208ENST00000482582 CD86P42081 329 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 PAFAH1B1P43034 410 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 MAP1BP46821 2468 aaKnown RBP11.9□□□□□ -0.5
TRAIP-208ENST00000482582 AP1S1P61966 158 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 RAD51Q06609 339 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 CNTN1Q12860 1018 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 CCDC137Q6PK04 289 aaKnown RBP11.9□□□□□ -0.5
TRAIP-208ENST00000482582 GDPD4Q6W3E5 623 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 DSG4Q86SJ6 1040 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 TAB3Q8N5C8 712 aaPredicted RBP11.9□□□□□ -0.5
TRAIP-208ENST00000482582 FAM160A2Q8N612 972 aaPredicted RBP11.9□□□□□ -0.5
TRAIP-208ENST00000482582 KIF18AQ8NI77 898 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 OXNAD1Q96HP4 312 aaPredicted RBP11.9□□□□□ -0.5
TRAIP-208ENST00000482582 GBA3Q9H227 469 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 SUV39H2Q9H5I1 410 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 ITM2CQ9NQX7 267 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 UBP1Q9NZI7 540 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 USP36Q9P275 1121 aaKnown RBP11.9□□□□□ -0.5
TRAIP-208ENST00000482582 NCDNQ9UBB6 729 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 FBXO4Q9UKT5 387 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 TRHDEQ9UKU6 1024 aa11.9□□□□□ -0.5
TRAIP-208ENST00000482582 SMG5Q9UPR3 1016 aaKnown RBP11.9□□□□□ -0.5
TRAIP-208ENST00000482582 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.9□□□□□ -0.5
TRAIP-208ENST00000482582 C16orf96A6NNT2 1141 aa11.89□□□□□ -0.51
TRAIP-208ENST00000482582 C1QTNF3-AMACRE9PGA6 284 aa11.89□□□□□ -0.51
TRAIP-208ENST00000482582 AXIN1O15169 862 aa11.89□□□□□ -0.51
TRAIP-208ENST00000482582 HTRA2O43464 458 aaPredicted RBP11.89□□□□□ -0.51
TRAIP-208ENST00000482582 GDF9O60383 454 aa11.89□□□□□ -0.51
TRAIP-208ENST00000482582 OPHN1O60890 802 aa11.89□□□□□ -0.51
TRAIP-208ENST00000482582 ADH1BP00325 375 aa11.89□□□□□ -0.51
TRAIP-208ENST00000482582 PRLP01236 227 aa11.89□□□□□ -0.51
TRAIP-208ENST00000482582 DNTTP04053 509 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms