RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 GK3PQ14409 553 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 MBTPS1Q14703 1052 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 RWDD4Q6NW29 188 aaKnown RBP15.03■□□□□ -0
ATG4B-220ENST00000482507 ARPINQ7Z6K5 226 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 CNTN4Q8IWV2 1026 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 FAM126BQ8IXS8 530 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 CCNYL1Q8N7R7 359 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 FAM156AQ8NDB6 213 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 LPPQ93052 612 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 ARMC5Q96C12 935 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 TSGA13Q96PP4 275 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 BTBD9Q96Q07 612 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 NPAS2Q99743 824 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 TBL1YQ9BQ87 522 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 RTP3Q9BQQ7 232 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 CRISPLD2Q9H0B8 497 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 SIK2Q9H0K1 926 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 TNFRSF12AQ9NP84 129 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 NDFIP2Q9NV92 336 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 C6orf203Q9P0P8 240 aaPredicted RBP15.03■□□□□ -0
ATG4B-220ENST00000482507 MID2Q9UJV3 735 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 CDYLQ9Y232 598 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 ACOT9Q9Y305 439 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 FAM95CA0A1B0GW59 222 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 DNAJA2O60884 412 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 OR6B1O95007 311 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 SLC1A2P43004 574 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 CHRNA4P43681 627 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 CHN2P52757 468 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 RAB10P61026 200 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 PRPSAP1Q14558 356 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 LPIN1Q14693 890 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 PCID2Q5JVF3 399 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 DCLRE1AQ6PJP8 1040 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 RPS27LQ71UM5 84 aaKnown RBP15.03■□□□□ -0
ATG4B-220ENST00000482507 SATL1Q86VE3 508 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 PAWRQ96IZ0 340 aaKnown RBP15.03■□□□□ -0
ATG4B-220ENST00000482507 KLHL32Q96NJ5 620 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 GAD1Q99259 594 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 FICDQ9BVA6 458 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 OSBPL2Q9H1P3 480 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 WDR41Q9HAD4 459 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 VPS28Q9UK41 221 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 PGFP49763 221 aa15.02■□□□□ -0
ATG4B-220ENST00000482507 TAS2R39P59534 338 aa15.02■□□□□ -0
ATG4B-220ENST00000482507 ADGRE1Q14246 886 aa15.02■□□□□ -0
ATG4B-220ENST00000482507 CNGA3Q16281 694 aa15.02■□□□□ -0
ATG4B-220ENST00000482507 CNSTQ6PJW8 725 aa15.02■□□□□ -0
ATG4B-220ENST00000482507 SLC39A5Q6ZMH5 540 aa15.02■□□□□ -0
ATG4B-220ENST00000482507 KDELC2Q7Z4H8 507 aa15.02■□□□□ -0
ATG4B-220ENST00000482507 TICAM1Q8IUC6 712 aa15.02■□□□□ -0
ATG4B-220ENST00000482507 BHLHE22Q8NFJ8 381 aaPredicted RBP15.02■□□□□ -0
ATG4B-220ENST00000482507 DQX1Q8TE96 717 aaKnown RBP15.02■□□□□ -0
ATG4B-220ENST00000482507 CENPKQ9BS16 269 aa15.02■□□□□ -0
ATG4B-220ENST00000482507 ZCWPW1Q9H0M4 648 aa15.02■□□□□ -0
ATG4B-220ENST00000482507 ATXN3LQ9H3M9 355 aa15.02■□□□□ -0
ATG4B-220ENST00000482507 COPS7BQ9H9Q2 264 aaPredicted RBP15.02■□□□□ -0
ATG4B-220ENST00000482507 A0A1B0GVG6 124 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 SDHDO14521 159 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 MGEA5O60502 916 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 ZNF189O75820 626 aaPredicted RBP15.02□□□□□ -0.01
ATG4B-220ENST00000482507 PGM3O95394 542 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 F9P00740 461 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 PABPC4LP0CB38 370 aaKnown RBP15.02□□□□□ -0.01
ATG4B-220ENST00000482507 KCNA5P22460 613 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 TRIM60Q495X7 471 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 ZNF789Q5FWF6 425 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 NOMO2Q5JPE7 1267 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 TRAF7Q6Q0C0 670 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 LINC00523Q86TU6 105 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 PGAM4Q8N0Y7 254 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 HMGCLL1Q8TB92 370 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 HEXDCQ8WVB3 486 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 MYLPFQ96A32 169 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 SERPINI1Q99574 410 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 TMLHEQ9NVH6 421 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 NSMCE4AQ9NXX6 385 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 VTI1BQ9UEU0 232 aa15.02□□□□□ -0.01
ATG4B-220ENST00000482507 FNDC1Q4ZHG4 1894 aaPredicted RBP15.01□□□□□ -0.01
ATG4B-220ENST00000482507 ACOT8O14734 319 aa15.01□□□□□ -0.01
ATG4B-220ENST00000482507 DENRO43583 198 aaKnown RBP15.01□□□□□ -0.01
ATG4B-220ENST00000482507 AP1G1O43747 822 aa15.01□□□□□ -0.01
ATG4B-220ENST00000482507 FAM163BP0C2L3 166 aa15.01□□□□□ -0.01
ATG4B-220ENST00000482507 HNRNPLP14866 589 aaKnown RBP eCLIP15.01□□□□□ -0.01
ATG4B-220ENST00000482507 ADRA1AP35348 466 aa15.01□□□□□ -0.01
ATG4B-220ENST00000482507 GJA8P48165 433 aa15.01□□□□□ -0.01
ATG4B-220ENST00000482507 LHX1P48742 406 aa15.01□□□□□ -0.01
ATG4B-220ENST00000482507 GK5Q6ZS86 529 aa15.01□□□□□ -0.01
ATG4B-220ENST00000482507 SDCCAG8Q86SQ7 713 aaPredicted RBP15.01□□□□□ -0.01
ATG4B-220ENST00000482507 MARVELD2Q8N4S9 558 aa15.01□□□□□ -0.01
ATG4B-220ENST00000482507 RNF34Q969K3 372 aa15.01□□□□□ -0.01
ATG4B-220ENST00000482507 ELMO2Q96JJ3 720 aa15.01□□□□□ -0.01
ATG4B-220ENST00000482507 TSNARE1Q96NA8 513 aa15.01□□□□□ -0.01
ATG4B-220ENST00000482507 PKP2Q99959 881 aa15.01□□□□□ -0.01
ATG4B-220ENST00000482507 SLC39A8Q9C0K1 460 aa15.01□□□□□ -0.01
ATG4B-220ENST00000482507 GLOD4Q9HC38 313 aa15.01□□□□□ -0.01
ATG4B-220ENST00000482507 CSNK1G1Q9HCP0 422 aa15.01□□□□□ -0.01
ATG4B-220ENST00000482507 COL4A4P53420 1690 aaPredicted RBP15.01□□□□□ -0.01
ATG4B-220ENST00000482507 CASTOR2A6NHX0 329 aa15.01□□□□□ -0.01
ATG4B-220ENST00000482507 SLC22A2O15244 555 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms