RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 DHTKD1Q96HY7 919 aaPredicted RBP4.26□□□□□ -1.73
VPS41-212ENST00000482217 BOD1Q96IK1 185 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 VCPIP1Q96JH7 1222 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 HS6ST2Q96MM7 605 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 GDAP1L1Q96MZ0 367 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 SH3GL1Q99961 368 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 SH3GL2Q99962 352 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 TUBA1CQ9BQE3 449 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 RIOK1Q9BRS2 568 aaKnown RBP4.26□□□□□ -1.73
VPS41-212ENST00000482217 NAA11Q9BSU3 229 aaPredicted RBP4.26□□□□□ -1.73
VPS41-212ENST00000482217 TBCDQ9BTW9 1192 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 ABCG8Q9H221 673 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 TTYH1Q9H313 450 aaPredicted RBP4.26□□□□□ -1.73
VPS41-212ENST00000482217 WDR26Q9H7D7 661 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 SIRT3Q9NTG7 399 aaPredicted RBP4.26□□□□□ -1.73
VPS41-212ENST00000482217 TBC1D23Q9NUY8 699 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 PPP1R14DQ9NXH3 145 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 TMOD2Q9NZR1 351 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 NDUFAF4Q9P032 175 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 CTTNBP2NLQ9P2B4 639 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 PI4KBQ9UBF8 816 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 HESX1Q9UBX0 185 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 TEKT2Q9UIF3 430 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 TLK1Q9UKI8 766 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 CLEC4AQ9UMR7 237 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 DAPP1Q9UN19 280 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 LIPT1Q9Y234 373 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 KCNK7Q9Y2U2 307 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 MTO1Q9Y2Z2 717 aaKnown RBP4.26□□□□□ -1.73
VPS41-212ENST00000482217 TNIKQ9UKE5 1360 aa4.26□□□□□ -1.73
VPS41-212ENST00000482217 MAP3K19Q56UN5 1328 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 SPATA31A3Q5VYP0 1347 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 PRAMEF33A0A0G2JMD5 474 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 A0A1W2PS29 197 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 XKRY2A2RUG3 117 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 MYADML2A6NDP7 307 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 OR6C76A6NM76 312 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 MARCH11A6NNE9 402 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 CLCA1A8K7I4 914 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 H0YIN7 160 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 PYCARD-AS1I3L0S3 204 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 CXCL11O14625 94 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 PRAMEF10O60809 474 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 KCNJ13O60928 360 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 ERN1O75460 977 aaKnown RBP4.25□□□□□ -1.73
VPS41-212ENST00000482217 DAB1O75553 588 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 PRDM1O75626 825 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 IDH1O75874 414 aaKnown RBP4.25□□□□□ -1.73
VPS41-212ENST00000482217 ALPPP05187 535 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 ANXA6P08133 673 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 ELANEP08246 267 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 ATXN1LP0C7T5 689 aaKnown RBP4.25□□□□□ -1.73
VPS41-212ENST00000482217 ALPPL2P10696 532 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 TACR2P21452 398 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 NFKBIAP25963 317 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 MCM7P33993 719 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 WNT5AP41221 380 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 PRKCIP41743 596 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 CAPZA2P47755 286 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 ANXA11P50995 505 aaKnown RBP4.25□□□□□ -1.73
VPS41-212ENST00000482217 PLTPP55058 493 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 UBE2HP62256 183 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 YPEL5P62699 121 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 SCAPQ12770 1279 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 IKQ13123 557 aaPredicted RBP4.25□□□□□ -1.73
VPS41-212ENST00000482217 PTK6Q13882 451 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 TUBB2AQ13885 445 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 IQCB1Q15051 598 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 PFKFB3Q16875 520 aaPredicted RBP4.25□□□□□ -1.73
VPS41-212ENST00000482217 MYLK3Q32MK0 819 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 SPDYE7PQ495Y7 208 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 KCTD21Q4G0X4 260 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 RAB41Q5JT25 222 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 TCTE1Q5JU00 501 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 SPDYAQ5MJ70 313 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 AKNAD1Q5T1N1 836 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 CRIP3Q6Q6R5 217 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 CORO6Q6QEF8 472 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 CYP20A1Q6UW02 462 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 FAM83HQ6ZRV2 1179 aaPredicted RBP4.25□□□□□ -1.73
VPS41-212ENST00000482217 SYT13Q7L8C5 426 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 TMPRSS9Q7Z410 1059 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 SPRED1Q7Z699 444 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 CLNKQ7Z7G1 428 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 NUDT13Q86X67 352 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 GAS2L3Q86XJ1 694 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 P3H2Q8IVL5 708 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 SIX6OS1Q8N1H7 587 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 ZNF321PQ8N8H1 164 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 Q8NA96 180 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 OR52M1Q8NGK5 317 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 IL17DQ8TAD2 202 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 SCFD2Q8WU76 684 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 SYN2Q92777 582 aaPredicted RBP4.25□□□□□ -1.73
VPS41-212ENST00000482217 EXT2Q93063 718 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 DHX58Q96C10 678 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 ZDHHC12Q96GR4 267 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 CNOT6LQ96LI5 555 aaKnown RBP4.25□□□□□ -1.73
VPS41-212ENST00000482217 ZSWIM1Q9BR11 485 aa4.25□□□□□ -1.73
VPS41-212ENST00000482217 RTKNQ9BST9 563 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms