RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 ZFP36L1Q07352 338 aaKnown RBP17.59■□□□□ 0.41
RXRB-203ENST00000481441 UBAP2LQ14157 1087 aaKnown RBP17.59■□□□□ 0.41
RXRB-203ENST00000481441 ENOSF1Q7L5Y1 443 aa17.59■□□□□ 0.41
RXRB-203ENST00000481441 ZSCAN1Q8NBB4 408 aa17.59■□□□□ 0.41
RXRB-203ENST00000481441 TP53I13Q8NBR0 393 aaPredicted RBP17.59■□□□□ 0.41
RXRB-203ENST00000481441 C1orf131Q8NDD1 294 aaKnown RBP17.59■□□□□ 0.41
RXRB-203ENST00000481441 ARHGEF26Q96DR7 871 aa17.59■□□□□ 0.41
RXRB-203ENST00000481441 PGAP3Q96FM1 320 aaPredicted RBP17.59■□□□□ 0.41
RXRB-203ENST00000481441 EDEM3Q9BZQ6 932 aa17.59■□□□□ 0.41
RXRB-203ENST00000481441 FOXJ2Q9P0K8 574 aa17.59■□□□□ 0.41
RXRB-203ENST00000481441 SEPT3Q9UH03 358 aa17.59■□□□□ 0.41
RXRB-203ENST00000481441 MMP20O60882 483 aa17.58■□□□□ 0.4
RXRB-203ENST00000481441 SMC2O95347 1197 aa17.58■□□□□ 0.4
RXRB-203ENST00000481441 ALPIP09923 528 aa17.58■□□□□ 0.4
RXRB-203ENST00000481441 GP1BBP13224 206 aa17.58■□□□□ 0.4
RXRB-203ENST00000481441 SULT1E1P49888 294 aa17.58■□□□□ 0.4
RXRB-203ENST00000481441 MORC3Q14149 939 aa17.58■□□□□ 0.4
RXRB-203ENST00000481441 PTPN20Q4JDL3 420 aa17.58■□□□□ 0.4
RXRB-203ENST00000481441 ACBD5Q5T8D3 534 aaPredicted RBP17.58■□□□□ 0.4
RXRB-203ENST00000481441 GJB7Q6PEY0 223 aa17.58■□□□□ 0.4
RXRB-203ENST00000481441 SMARCE1Q969G3 411 aa17.58■□□□□ 0.4
RXRB-203ENST00000481441 TMEM159Q96B96 161 aa17.58■□□□□ 0.4
RXRB-203ENST00000481441 EPAS1Q99814 870 aa17.58■□□□□ 0.4
RXRB-203ENST00000481441 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.58■□□□□ 0.4
RXRB-203ENST00000481441 STAP1Q9ULZ2 295 aa17.58■□□□□ 0.4
RXRB-203ENST00000481441 GPR34Q9UPC5 381 aa17.58■□□□□ 0.4
RXRB-203ENST00000481441 PAXBP1Q9Y5B6 917 aa17.58■□□□□ 0.4
RXRB-203ENST00000481441 ATP6V1DQ9Y5K8 247 aa17.58■□□□□ 0.4
RXRB-203ENST00000481441 SDK2Q58EX2 2172 aa17.58■□□□□ 0.4
RXRB-203ENST00000481441 ZFC3H1O60293 1989 aaKnown RBP17.57■□□□□ 0.4
RXRB-203ENST00000481441 CXorf51AA0A1B0GTR3 108 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 A0A1W2PQC6 194 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 C9orf172C9J069 976 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 SRGAP2O75044 1071 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 TM7SF2O76062 418 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 F9P00740 461 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 UGT2B4P06133 528 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 DEUP1Q05D60 604 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 STIM1Q13586 685 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 TCEA2Q15560 299 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 ALG11Q2TAA5 492 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 LRRC73Q5JTD7 316 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 CCNJLQ8IV13 435 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 HID1Q8IV36 788 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 RYBPQ8N488 228 aaPredicted RBP17.57■□□□□ 0.4
RXRB-203ENST00000481441 GPR156Q8NFN8 814 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 OR6C4Q8NGE1 309 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 USP7Q93009 1102 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 TSACCQ96A04 125 aaPredicted RBP17.57■□□□□ 0.4
RXRB-203ENST00000481441 KLHL32Q96NJ5 620 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 TBCBQ99426 244 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 C1QTNF7Q9BXJ2 289 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 ZYG11BQ9C0D3 744 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 PCDHB11Q9Y5F2 797 aa17.57■□□□□ 0.4
RXRB-203ENST00000481441 USP9YO00507 2555 aaPredicted RBP17.56■□□□□ 0.4
RXRB-203ENST00000481441 CLEC18AA5D8T8 446 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.56■□□□□ 0.4
RXRB-203ENST00000481441 AGRPO00253 132 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 KRIT1O00522 736 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 RASGRP1O95267 797 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 GSRP00390 522 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 CTSEP14091 401 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 USP8P40818 1118 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 PEX5P50542 639 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 MARSP56192 900 aaKnown RBP17.56■□□□□ 0.4
RXRB-203ENST00000481441 SNX16P57768 344 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 RNASE9P60153 205 aaKnown RBP17.56■□□□□ 0.4
RXRB-203ENST00000481441 IRF4Q15306 451 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 KLHL40Q2TBA0 621 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 ISM2Q6H9L7 571 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 FOXR2Q6PJQ5 311 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 CLEC18BQ6UXF7 455 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 NYAP1Q6ZVC0 841 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 TTC7BQ86TV6 843 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 GKN2Q86XP6 184 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 ZDHHC17Q8IUH5 632 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 DRC7Q8IY82 874 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 CLEC18CQ8NCF0 446 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 OR2AP1Q8NGE2 309 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 ZNF564Q8TBZ8 553 aaPredicted RBP17.56■□□□□ 0.4
RXRB-203ENST00000481441 ARHGEF2Q92974 986 aaKnown RBP17.56■□□□□ 0.4
RXRB-203ENST00000481441 OSBPL1AQ9BXW6 950 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 ADNPQ9H2P0 1102 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 GDPD2Q9HCC8 539 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 APPL1Q9UKG1 709 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.56■□□□□ 0.4
RXRB-203ENST00000481441 TEX15Q9BXT5 2789 aa17.56■□□□□ 0.4
RXRB-203ENST00000481441 POP4O95707 220 aaKnown RBP17.55■□□□□ 0.4
RXRB-203ENST00000481441 ITIH2P19823 946 aa17.55■□□□□ 0.4
RXRB-203ENST00000481441 CD82P27701 267 aa17.55■□□□□ 0.4
RXRB-203ENST00000481441 ACVRL1P37023 503 aa17.55■□□□□ 0.4
RXRB-203ENST00000481441 ARHGAP44Q17R89 818 aa17.55■□□□□ 0.4
RXRB-203ENST00000481441 MYLK3Q32MK0 819 aa17.55■□□□□ 0.4
RXRB-203ENST00000481441 SLC25A52Q3SY17 297 aa17.55■□□□□ 0.4
RXRB-203ENST00000481441 KLHL10Q6JEL2 608 aa17.55■□□□□ 0.4
RXRB-203ENST00000481441 TRIM65Q6PJ69 517 aa17.55■□□□□ 0.4
RXRB-203ENST00000481441 CLEC17AQ6ZS10 378 aa17.55■□□□□ 0.4
RXRB-203ENST00000481441 Q8N9G6 341 aaPredicted RBP17.55■□□□□ 0.4
RXRB-203ENST00000481441 CXorf40AQ8TE69 158 aa17.55■□□□□ 0.4
RXRB-203ENST00000481441 SHC3Q92529 594 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms