RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 RGSL1A5PLK6 1076 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 CCL22O00626 93 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 COL6A2P12110 1019 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 PRKAR2AP13861 404 aaKnown RBP17.28■□□□□ 0.36
PKD1-213ENST00000480227 RAG1P15918 1043 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 HTR7P34969 479 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 CD86P42081 329 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 CD151P48509 253 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 SLC12A2P55011 1212 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 EFEMP1Q12805 493 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 RNF220Q5VTB9 566 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 KDELC1Q6UW63 502 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 GLB1LQ6UWU2 654 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 NUP93Q8N1F7 819 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 ATAD1Q8NBU5 361 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 HEXDCQ8WVB3 486 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 ZCWPW1Q9H0M4 648 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 EBF3Q9H4W6 596 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 CDYLQ9Y232 598 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 TLR6Q9Y2C9 796 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 FIS1Q9Y3D6 152 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 PLXNA3P51805 1871 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 MAGEA13PA6NCF6 341 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 RPLP2P05387 115 aaKnown RBP17.28■□□□□ 0.36
PKD1-213ENST00000480227 ZCCHC18P0CG32 403 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 PAMP19021 973 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 MSX2P35548 267 aaPredicted RBP17.28■□□□□ 0.36
PKD1-213ENST00000480227 CSHL1Q14406 222 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 EML3Q32P44 896 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 MS4A13Q5J8X5 152 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 OR52E8Q6IFG1 317 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 NEPROQ6NW34 567 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 MON1AQ86VX9 555 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 ZNF354CQ86Y25 554 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 PHC3Q8NDX5 983 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 JADE3Q92613 823 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 SLC39A13Q96H72 371 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 SCML2Q9UQR0 700 aa17.28■□□□□ 0.36
PKD1-213ENST00000480227 FAM155AB1AL88 458 aaPredicted RBP17.27■□□□□ 0.36
PKD1-213ENST00000480227 HNRNPLP14866 589 aaKnown RBP eCLIP17.27■□□□□ 0.36
PKD1-213ENST00000480227 PEX2P28328 305 aa17.27■□□□□ 0.36
PKD1-213ENST00000480227 PPARGP37231 505 aaPredicted RBP17.27■□□□□ 0.36
PKD1-213ENST00000480227 CCNHP51946 323 aaPredicted RBP17.27■□□□□ 0.36
PKD1-213ENST00000480227 TBX4P57082 545 aa17.27■□□□□ 0.36
PKD1-213ENST00000480227 INHBEP58166 350 aa17.27■□□□□ 0.36
PKD1-213ENST00000480227 DSC2Q02487 901 aa17.27■□□□□ 0.36
PKD1-213ENST00000480227 CYLC2Q14093 348 aaPredicted RBP17.27■□□□□ 0.36
PKD1-213ENST00000480227 MBTPS1Q14703 1052 aa17.27■□□□□ 0.36
PKD1-213ENST00000480227 KIAA0930Q6ICG6 404 aaPredicted RBP17.27■□□□□ 0.36
PKD1-213ENST00000480227 ADGRG6Q86SQ4 1221 aa17.27■□□□□ 0.36
PKD1-213ENST00000480227 CIR1Q86X95 450 aaPredicted RBP17.27■□□□□ 0.36
PKD1-213ENST00000480227 MIB1Q86YT6 1006 aa17.27■□□□□ 0.36
PKD1-213ENST00000480227 ZNF683Q8IZ20 524 aa17.27■□□□□ 0.36
PKD1-213ENST00000480227 TXNDC5Q8NBS9 432 aaKnown RBP17.27■□□□□ 0.36
PKD1-213ENST00000480227 GDPD5Q8WTR4 605 aa17.27■□□□□ 0.36
PKD1-213ENST00000480227 LINC01599Q8WXQ3 324 aa17.27■□□□□ 0.36
PKD1-213ENST00000480227 PSMG2Q969U7 264 aa17.27■□□□□ 0.36
PKD1-213ENST00000480227 RCN3Q96D15 328 aa17.27■□□□□ 0.36
PKD1-213ENST00000480227 OLFM1Q99784 485 aa17.27■□□□□ 0.36
PKD1-213ENST00000480227 MRPL46Q9H2W6 279 aaKnown RBP17.27■□□□□ 0.36
PKD1-213ENST00000480227 POMKQ9H5K3 350 aa17.27■□□□□ 0.36
PKD1-213ENST00000480227 CYP4F12Q9HCS2 524 aa17.27■□□□□ 0.36
PKD1-213ENST00000480227 CFLARO15519 480 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 GJB3O75712 270 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 HMBSP08397 361 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 CPB1P15086 417 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 PRKAA2P54646 552 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 NKX3-2P78367 333 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 DSC1Q08554 894 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 SFT2D3Q587I9 215 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 SH2D4BQ5SQS7 431 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 LDB1Q86U70 411 aaPredicted RBP17.26■□□□□ 0.35
PKD1-213ENST00000480227 LCA5Q86VQ0 697 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 CCDC117Q8IWD4 279 aaPredicted RBP17.26■□□□□ 0.35
PKD1-213ENST00000480227 DSELQ8IZU8 1212 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 KYQ8NBH2 561 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 PTCD2Q8WV60 388 aaKnown RBP17.26■□□□□ 0.35
PKD1-213ENST00000480227 CNDP1Q96KN2 507 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 CDRT15Q96T59 188 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 SLC25A51Q9H1U9 297 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 SUDS3Q9H7L9 328 aaPredicted RBP17.26■□□□□ 0.35
PKD1-213ENST00000480227 MRM3Q9HC36 420 aaKnown RBP17.26■□□□□ 0.35
PKD1-213ENST00000480227 TBC1D13Q9NVG8 400 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 VTI1BQ9UEU0 232 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 ARHGEF37A1IGU5 675 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 OAZ2O95190 189 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 ARPP19P56211 112 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 TRIP10Q15642 601 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 FAM219BQ5XKK7 198 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 RPS27LQ71UM5 84 aaKnown RBP17.26■□□□□ 0.35
PKD1-213ENST00000480227 COLGALT2Q8IYK4 626 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 RNF148Q8N7C7 305 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 IGSF8Q969P0 613 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 IMP4Q96G21 291 aaKnown RBP17.26■□□□□ 0.35
PKD1-213ENST00000480227 C1orf74Q96LT6 269 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 PRDM5Q9NQX1 630 aaPredicted RBP17.26■□□□□ 0.35
PKD1-213ENST00000480227 RGS18Q9NS28 235 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 GTSE1Q9NYZ3 720 aa17.26■□□□□ 0.35
PKD1-213ENST00000480227 MTF2Q9Y483 593 aaPredicted RBP17.26■□□□□ 0.35
PKD1-213ENST00000480227 CA12O43570 354 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms