RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 AP1G1O43747 822 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 PIGNO95427 931 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 GNG11P61952 73 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 ITKQ08881 620 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 FBXL19Q6PCT2 694 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 CAMK1DQ8IU85 385 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 RASGEF1CQ8N431 466 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 OR14C36Q8NHC7 312 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 NKD2Q969F2 451 aaPredicted RBP19.94■□□□□ 0.78
LIME1-205ENST00000480139 TEKT5Q96M29 485 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 NSMCE3Q96MG7 304 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 GPR174Q9BXC1 333 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 PREBQ9HCU5 417 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 SEPT10Q9P0V9 454 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 TRHDEQ9UKU6 1024 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 TTC7AQ9ULT0 858 aaPredicted RBP19.94■□□□□ 0.78
LIME1-205ENST00000480139 R3HDM2Q9Y2K5 976 aaKnown RBP19.94■□□□□ 0.78
LIME1-205ENST00000480139 ABCA7Q8IZY2 2146 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 NUMA1Q14980 2115 aa19.93■□□□□ 0.78
LIME1-205ENST00000480139 PLK4O00444 970 aa19.93■□□□□ 0.78
LIME1-205ENST00000480139 CEP104O60308 925 aa19.93■□□□□ 0.78
LIME1-205ENST00000480139 LMNAP02545 664 aaKnown RBP19.93■□□□□ 0.78
LIME1-205ENST00000480139 FGGP02679 453 aa19.93■□□□□ 0.78
LIME1-205ENST00000480139 RBL1P28749 1068 aa19.93■□□□□ 0.78
LIME1-205ENST00000480139 CXCR5P32302 372 aa19.93■□□□□ 0.78
LIME1-205ENST00000480139 TAS2R38P59533 333 aa19.93■□□□□ 0.78
LIME1-205ENST00000480139 SLC14A2Q15849 920 aa19.93■□□□□ 0.78
LIME1-205ENST00000480139 NEK5Q6P3R8 708 aa19.93■□□□□ 0.78
LIME1-205ENST00000480139 DARS2Q6PI48 645 aaKnown RBP19.93■□□□□ 0.78
LIME1-205ENST00000480139 B4GALNT4Q76KP1 1039 aa19.93■□□□□ 0.78
LIME1-205ENST00000480139 OSBPL9Q96SU4 736 aa19.93■□□□□ 0.78
LIME1-205ENST00000480139 SNX12Q9UMY4 172 aa19.93■□□□□ 0.78
LIME1-205ENST00000480139 TTLL3Q9Y4R7 772 aa19.93■□□□□ 0.78
LIME1-205ENST00000480139 MYO15AQ9UKN7 3530 aa19.93■□□□□ 0.78
LIME1-205ENST00000480139 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.92■□□□□ 0.78
LIME1-205ENST00000480139 METTL12A8MUP2 240 aa19.92■□□□□ 0.78
LIME1-205ENST00000480139 SERPINF2P08697 491 aa19.92■□□□□ 0.78
LIME1-205ENST00000480139 DPP6P42658 865 aa19.92■□□□□ 0.78
LIME1-205ENST00000480139 POLR2LP62875 67 aaKnown RBP19.92■□□□□ 0.78
LIME1-205ENST00000480139 DSC2Q02487 901 aa19.92■□□□□ 0.78
LIME1-205ENST00000480139 SIX1Q15475 284 aaPredicted RBP19.92■□□□□ 0.78
LIME1-205ENST00000480139 CFAP58Q5T655 872 aa19.92■□□□□ 0.78
LIME1-205ENST00000480139 ZSCAN30Q86W11 494 aa19.92■□□□□ 0.78
LIME1-205ENST00000480139 SLC41A1Q8IVJ1 513 aa19.92■□□□□ 0.78
LIME1-205ENST00000480139 TMEFF1Q8IYR6 380 aa19.92■□□□□ 0.78
LIME1-205ENST00000480139 IMP4Q96G21 291 aaKnown RBP19.92■□□□□ 0.78
LIME1-205ENST00000480139 AGAP3Q96P47 875 aa19.92■□□□□ 0.78
LIME1-205ENST00000480139 WDR24Q96S15 920 aa19.92■□□□□ 0.78
LIME1-205ENST00000480139 FAM118BQ9BPY3 351 aa19.92■□□□□ 0.78
LIME1-205ENST00000480139 CEP41Q9BYV8 373 aa19.92■□□□□ 0.78
LIME1-205ENST00000480139 SLC25A51Q9H1U9 297 aa19.92■□□□□ 0.78
LIME1-205ENST00000480139 DMDP11532 3685 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 TTC24A2A3L6 582 aaPredicted RBP19.91■□□□□ 0.78
LIME1-205ENST00000480139 CFAP69A5D8W1 941 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 AREL1O15033 823 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 LIASO43766 372 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 STK10O94804 968 aaKnown RBP19.91■□□□□ 0.78
LIME1-205ENST00000480139 EPN2O95208 641 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 TIMP2P16035 220 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 PRLRP16471 622 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 TCP1P17987 556 aaKnown RBP19.91■□□□□ 0.78
LIME1-205ENST00000480139 CA4P22748 312 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 ABL2P42684 1182 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 CCR5P51681 352 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 NIPAL4Q0D2K0 466 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 TRAF2Q12933 501 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 UGP2Q16851 508 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 PAPD7Q5XG87 772 aaKnown RBP19.91■□□□□ 0.78
LIME1-205ENST00000480139 LYSMD4Q5XG99 296 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 KIAA0895LQ68EN5 471 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 TRIM69Q86WT6 500 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 ZNF567Q8N184 647 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 TADA1Q96BN2 335 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 HSPA12BQ96MM6 686 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 NAP1L3Q99457 506 aaPredicted RBP19.91■□□□□ 0.78
LIME1-205ENST00000480139 NAPGQ99747 312 aaPredicted RBP19.91■□□□□ 0.78
LIME1-205ENST00000480139 C6orf106Q9H6K1 298 aaPredicted RBP19.91■□□□□ 0.78
LIME1-205ENST00000480139 USP29Q9HBJ7 922 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 GLOD4Q9HC38 313 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 KLHL8Q9P2G9 620 aaPredicted RBP19.91■□□□□ 0.78
LIME1-205ENST00000480139 DNPEPQ9ULA0 475 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.91■□□□□ 0.78
LIME1-205ENST00000480139 PCDHGA5Q9Y5G8 931 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 FADS3Q9Y5Q0 445 aa19.91■□□□□ 0.78
LIME1-205ENST00000480139 VPS13AQ96RL7 3174 aa19.9■□□□□ 0.78
LIME1-205ENST00000480139 UPK3BL1B0FP48 263 aa19.9■□□□□ 0.78
LIME1-205ENST00000480139 UPK3BL2E5RIL1 263 aa19.9■□□□□ 0.78
LIME1-205ENST00000480139 KCNN4O15554 427 aa19.9■□□□□ 0.78
LIME1-205ENST00000480139 TSPAN6O43657 245 aa19.9■□□□□ 0.78
LIME1-205ENST00000480139 FZD6O60353 706 aa19.9■□□□□ 0.78
LIME1-205ENST00000480139 RETP07949 1114 aa19.9■□□□□ 0.78
LIME1-205ENST00000480139 MMP2P08253 660 aa19.9■□□□□ 0.78
LIME1-205ENST00000480139 CD68P34810 354 aaPredicted RBP19.9■□□□□ 0.78
LIME1-205ENST00000480139 HOXD12P35452 270 aa19.9■□□□□ 0.78
LIME1-205ENST00000480139 PTGER3P43115 390 aa19.9■□□□□ 0.78
LIME1-205ENST00000480139 DHPSP49366 369 aaPredicted RBP19.9■□□□□ 0.78
LIME1-205ENST00000480139 SKOR1P84550 965 aa19.9■□□□□ 0.78
LIME1-205ENST00000480139 ELP6Q0PNE2 266 aa19.9■□□□□ 0.78
LIME1-205ENST00000480139 IHHQ14623 411 aa19.9■□□□□ 0.78
LIME1-205ENST00000480139 OASLQ15646 514 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms