RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 LIMS2Q7Z4I7 341 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 SETD3Q86TU7 594 aaPredicted RBP13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 CLVS1Q8IUQ0 354 aaPredicted RBP13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 SREK1Q8WXA9 508 aaKnown RBP13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 NT5C3BQ969T7 300 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 HNRNPABQ99729 332 aaKnown RBP13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 PAAF1Q9BRP4 392 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 MED10Q9BTT4 135 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 OSBPL11Q9BXB4 747 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 SBF1O95248 1867 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 MBLAC1A4D2B0 266 aaPredicted RBP13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 NEMP2A6NFY4 417 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 EEF2KO00418 725 aaKnown RBP13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 DCLK1O15075 740 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 ZBTB24O43167 697 aaPredicted RBP13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 F2P00734 622 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 C8BP07358 591 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 USP17L7P0C7H9 530 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 SLC35E2BP0CK96 405 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 NPR3P17342 541 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 GABRB3P28472 473 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 ETFBP38117 255 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 GLUD2P49448 558 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 CLCN2P51788 898 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 RHDQ02161 417 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 HERC3Q15034 1050 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 PPP1R3AQ16821 1122 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 CNTD1Q8N815 330 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 SMYD1Q8NB12 490 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 LPPQ93052 612 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 FAM124BQ9H5Z6 455 aaPredicted RBP13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 LRRC4Q9HBW1 653 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 TRPC7Q9HCX4 862 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 XPR1Q9UBH6 696 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 TLL2Q9Y6L7 1015 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 NUP205Q92621 2012 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 RRN3P2A6NIE6 340 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 TARM1B6A8C7 271 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 SDHDO14521 159 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 CD4P01730 458 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 UGT1A6P19224 532 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 PTPN3P26045 913 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 CD68P34810 354 aaPredicted RBP13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 ACADSBP45954 432 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 PSMD7P51665 324 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 SNX16P57768 344 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 ADAM17P78536 824 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 MFSD10Q14728 455 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 NHSL2Q5HYW2 709 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 SLC41A1Q8IVJ1 513 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 LZTR1Q8N653 840 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 C3orf58Q8NDZ4 430 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 ZMIZ2Q8NF64 920 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 ISOC1Q96CN7 298 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 SMOQ99835 787 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 IL22Q9GZX6 179 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 WDR6Q9NNW5 1121 aaKnown RBP13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 MIOSQ9NXC5 875 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 BFARQ9NZS9 450 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 CCDC167Q9P0B6 97 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 IGSF9Q9P2J2 1179 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 NRCAMQ92823 1304 aa13.44□□□□□ -0.26
PDZRN3-208ENST00000479530 SMIM35A0A1B0GVV1 85 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 H2AFYO75367 372 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 KCNE1P15382 129 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 FUT4P22083 530 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 NOS2P35228 1153 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 ADRA1BP35368 520 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 CSRP3P50461 194 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 NAA20P61599 178 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 ZBTB17Q13105 803 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 CBX3Q13185 183 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 USP10Q14694 798 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 C6orf10Q5SRN2 563 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 Q6ZNX1 250 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 USP50Q70EL3 339 aaPredicted RBP13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 CHSY3Q70JA7 882 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 BNIPLQ7Z465 357 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 ZBTB46Q86UZ6 589 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 CEP97Q8IW35 865 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 MFSD6LQ8IWD5 586 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 STYXQ8WUJ0 223 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 WNT8BQ93098 351 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 PPWD1Q96BP3 646 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 MLPHQ9BV36 600 aaPredicted RBP13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 PNPLA3Q9NST1 481 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 FAIMQ9NVQ4 179 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 CACNA2D2Q9NY47 1150 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 CPA4Q9UI42 421 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 TLK1Q9UKI8 766 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 CNOT6Q9ULM6 557 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 ZSWIM8A7E2V4 1837 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 TRIP12Q14669 1992 aaPredicted RBP13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 SH3PXD2BA1X283 911 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 ZNF839A8K0R7 811 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 TRIM24O15164 1050 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 SLC22A2O15244 555 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 DAB1O75553 588 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 CABYRO75952 493 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms