RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 ELAVL3Q14576 367 aaKnown RBP6.78□□□□□ -1.32
VCP-205ENST00000479300 ISXQ2M1V0 245 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 ZNF284Q2VY69 593 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 C11orf91Q3C1V1 193 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 SLC25A52Q3SY17 297 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 PTPN20Q4JDL3 420 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 ZNF542PQ5EBM4 170 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 C3orf38Q5JPI3 329 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 COLEC12Q5KU26 742 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 TPRG1LQ5T0D9 272 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 PIP5KL1Q5T9C9 394 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 BROXQ5VW32 411 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 CXorf57Q6NSI4 855 aaKnown RBP6.78□□□□□ -1.32
VCP-205ENST00000479300 FBXL22Q6P050 247 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 OLFML1Q6UWY5 402 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 TRIM72Q6ZMU5 477 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 GCNT7Q6ZNI0 430 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 PRICKLE2Q7Z3G6 844 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 PRPF39Q86UA1 669 aaKnown RBP6.78□□□□□ -1.32
VCP-205ENST00000479300 WDTC1Q8N5D0 677 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 ATP11CQ8NB49 1132 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 ENOX1Q8TC92 643 aaKnown RBP6.78□□□□□ -1.32
VCP-205ENST00000479300 ALG14Q96F25 216 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 ATXN7L3BQ96GX2 97 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 SLC46A1Q96NT5 459 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 DEPDC7Q96QD5 511 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 DPH1Q9BZG8 443 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 TKTL2Q9H0I9 626 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 GPR27Q9NS67 375 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 SAMSN1Q9NSI8 373 aaKnown RBP6.78□□□□□ -1.32
VCP-205ENST00000479300 SEPT11Q9NVA2 429 aaKnown RBP6.78□□□□□ -1.32
VCP-205ENST00000479300 KLHL11Q9NVR0 708 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 IL17BQ9UHF5 180 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 KLF15Q9UIH9 416 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 RAB21Q9UL25 225 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 PPM1HQ9ULR3 514 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 ZFR2Q9UPR6 939 aaKnown RBP6.78□□□□□ -1.32
VCP-205ENST00000479300 DMTF1Q9Y222 760 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 ENTPD2Q9Y5L3 495 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 HS3ST4Q9Y661 456 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 RP1P56715 2156 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 AHCTF1Q8WYP5 2266 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 F8VZ95 297 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 PRAMEF26H0Y7S4 382 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 K7ESM1 405 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 ALOX15BO15296 676 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 SLC31A1O15431 190 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 SLC7A4O43246 635 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 NOBOXO60393 691 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 RNGTTO60942 597 aaKnown RBP6.77□□□□□ -1.33
VCP-205ENST00000479300 SRGAP2O75044 1071 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 URI1O94763 535 aaPredicted RBP6.77□□□□□ -1.33
VCP-205ENST00000479300 CTSLP07711 333 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 THEGLP0DJG4 465 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 OR1E1P30953 314 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 SDC4P31431 198 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 ETFBP38117 255 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 NSFP46459 744 aaKnown RBP6.77□□□□□ -1.33
VCP-205ENST00000479300 GABRB2P47870 512 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 CXCR3P49682 368 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 POLR2FP61218 127 aaKnown RBP6.77□□□□□ -1.33
VCP-205ENST00000479300 IRX1P78414 480 aaPredicted RBP6.77□□□□□ -1.33
VCP-205ENST00000479300 MYL5Q02045 173 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 CENPCQ03188 943 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 NFATC3Q12968 1075 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 FGL2Q14314 439 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 STAT4Q14765 748 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 DLG2Q15700 870 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 MIIPQ5JXC2 388 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 PERM1Q5SV97 790 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 NAA35Q5VZE5 725 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 RETSATQ6NUM9 610 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 GUSBP11Q6P575 273 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 CRTC1Q6UUV9 634 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 CLEC14AQ86T13 490 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 SETD3Q86TU7 594 aaPredicted RBP6.77□□□□□ -1.33
VCP-205ENST00000479300 XYLT1Q86Y38 959 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 LSMEM2Q8N112 164 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 IFI44Q8TCB0 444 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 CPA5Q8WXQ8 436 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 ARRDC3Q96B67 414 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 PGAP3Q96FM1 320 aaPredicted RBP6.77□□□□□ -1.33
VCP-205ENST00000479300 KLHDC7BQ96G42 594 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 PPP1R16AQ96I34 528 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 C1orf74Q96LT6 269 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 TBCBQ99426 244 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 NPY6RQ99463 290 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 PRMT1Q99873 361 aaKnown RBP6.77□□□□□ -1.33
VCP-205ENST00000479300 FEM1AQ9BSK4 669 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 SPON2Q9BUD6 331 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 SELENOOQ9BVL4 669 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 PARD6BQ9BYG5 372 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 NLRC4Q9NPP4 1024 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 THSD1Q9NS62 852 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 FAM207AQ9NSI2 230 aaPredicted RBP6.77□□□□□ -1.33
VCP-205ENST00000479300 NLGN3Q9NZ94 848 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 VPS18Q9P253 973 aa6.77□□□□□ -1.33
VCP-205ENST00000479300 AJAP1Q9UKB5 411 aaPredicted RBP6.77□□□□□ -1.33
VCP-205ENST00000479300 PNMA8BQ9ULN7 279 aaPredicted RBP6.77□□□□□ -1.33
VCP-205ENST00000479300 HPCAL4Q9UM19 191 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms