RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 BOCQ9BWV1 1114 aa16.93■□□□□ 0.3
TRIM13-208ENST00000478111 TTYH3Q9C0H2 523 aa16.93■□□□□ 0.3
TRIM13-208ENST00000478111 ABCG4Q9H172 646 aa16.93■□□□□ 0.3
TRIM13-208ENST00000478111 MBNL1Q9NR56 388 aaKnown RBP16.93■□□□□ 0.3
TRIM13-208ENST00000478111 MFHAS1Q9Y4C4 1052 aa16.93■□□□□ 0.3
TRIM13-208ENST00000478111 TEX51A0A1B0GUA7 166 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 CPED1A4D0V7 1026 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 BUB1O43683 1085 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 MMP20O60882 483 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 TIMP2P16035 220 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 GPD1P21695 349 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 PCBP4P57723 403 aaKnown RBP16.92■□□□□ 0.3
TRIM13-208ENST00000478111 ERVPABLB-1P60509 514 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 CXADRP78310 365 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 C1orf61Q13536 156 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 CLEC16AQ2KHT3 1053 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 INO80DQ53TQ3 878 aaPredicted RBP16.92■□□□□ 0.3
TRIM13-208ENST00000478111 PERM1Q5SV97 790 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 SLFN11Q7Z7L1 901 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 VPS36Q86VN1 386 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 RTL3Q8N8U3 475 aaKnown RBP16.92■□□□□ 0.3
TRIM13-208ENST00000478111 TP53I13Q8NBR0 393 aaPredicted RBP16.92■□□□□ 0.3
TRIM13-208ENST00000478111 C3orf20Q8ND61 904 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 NAF1Q96HR8 494 aaKnown RBP16.92■□□□□ 0.3
TRIM13-208ENST00000478111 LGMNQ99538 433 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 CLPBQ9H078 707 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 EVA1BQ9NVM1 165 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 NCKIPSDQ9NZQ3 722 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 ADAM22Q9P0K1 906 aa16.92■□□□□ 0.3
TRIM13-208ENST00000478111 UNC13CQ8NB66 2214 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 ZSCAN5CA6NGD5 496 aaPredicted RBP16.91■□□□□ 0.3
TRIM13-208ENST00000478111 SIGLEC16A6NMB1 481 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 INSIG1O15503 277 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 CCP110O43303 1012 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 STAT1P42224 750 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 NSFP46459 744 aaKnown RBP16.91■□□□□ 0.3
TRIM13-208ENST00000478111 ADKP55263 362 aaKnown RBP16.91■□□□□ 0.3
TRIM13-208ENST00000478111 YPEL5P62699 121 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 C19orf57Q0VDD7 668 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 PRRT3Q5FWE3 981 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 IGF2-ASQ6U949 168 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 CRTC1Q6UUV9 634 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 SLC35F3Q8IY50 421 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 PHACTR4Q8IZ21 702 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 BTN2A2Q8WVV5 523 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 CASKIN2Q8WXE0 1202 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 PRR11Q96HE9 360 aaPredicted RBP16.91■□□□□ 0.3
TRIM13-208ENST00000478111 TBATAQ96M53 351 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 GDAP1L1Q96MZ0 367 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 IL12RB2Q99665 862 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 LRRC61Q9BV99 259 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 SPASTQ9UBP0 616 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 DKK3Q9UBP4 350 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 APOBEC3BQ9UH17 382 aaKnown RBP16.91■□□□□ 0.3
TRIM13-208ENST00000478111 SSUH2Q9Y2M2 353 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 DAAM1Q9Y4D1 1078 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 ENTPD2Q9Y5L3 495 aa16.91■□□□□ 0.3
TRIM13-208ENST00000478111 WASH4PA8MWX3 477 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 RASA4BC9J798 803 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 LMO7DNF2Z398 122 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 RIOK3O14730 519 aaKnown RBP16.9■□□□□ 0.3
TRIM13-208ENST00000478111 RASA4O43374 803 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 TM7SF2O76062 418 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 EPHB2P29323 1055 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 EIF4A3P38919 411 aaKnown RBP16.9■□□□□ 0.3
TRIM13-208ENST00000478111 THOP1P52888 689 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 YBEYP58557 167 aaPredicted RBP16.9■□□□□ 0.3
TRIM13-208ENST00000478111 RPL7AP62424 266 aaKnown RBP16.9■□□□□ 0.3
TRIM13-208ENST00000478111 SKOR1P84550 965 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 SERINC3Q13530 473 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 PTK2BQ14289 1009 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 SYCP1Q15431 976 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 CYTH1Q15438 398 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 NR0B2Q15466 257 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 KLHL40Q2TBA0 621 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 TMEM52BQ4KMG9 183 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 PPP1R15BQ5SWA1 713 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 MON1BQ7L1V2 547 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 HMCESQ96FZ2 354 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 ATXN7L3BQ96GX2 97 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 EPAS1Q99814 870 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 SELENOOQ9BVL4 669 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 CPEB1Q9BZB8 566 aaKnown RBP16.9■□□□□ 0.3
TRIM13-208ENST00000478111 FANCLQ9NW38 375 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 LHX3Q9UBR4 397 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 FZD10Q9ULW2 581 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 SATB2Q9UPW6 733 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 AHCTF1Q8WYP5 2266 aa16.9■□□□□ 0.3
TRIM13-208ENST00000478111 PMS2P1A4D2B8 440 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 MUSKO15146 869 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 YY2O15391 372 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 IGSF6O95976 241 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 CALB1P05937 261 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 CELA2BP08218 269 aaPredicted RBP16.89■□□□□ 0.29
TRIM13-208ENST00000478111 TSHRP16473 764 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 ZNF143P52747 638 aaPredicted RBP16.89■□□□□ 0.29
TRIM13-208ENST00000478111 RHOAP61586 193 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 C6orf132Q5T0Z8 1188 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 MACC1Q6ZN28 852 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 RBM43Q6ZSC3 357 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms