RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 PPP2R5EQ16537 467 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 ZNF805Q5CZA5 627 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 WDR45BQ5MNZ6 344 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 SYCP2LQ5T4T6 812 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 CCDC181Q5TID7 509 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 TBC1D3GQ6DHY5 549 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 TBC1D3CQ6IPX1 549 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 FBXL19Q6PCT2 694 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 SRLQ86TD4 932 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 CAMK1DQ8IU85 385 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 LRRC49Q8IUZ0 686 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 SYT12Q8IV01 421 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 CCDC13Q8IYE1 715 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 TBC1D3Q8IZP1 549 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-222ENST00000478095 BBS5Q8N3I7 341 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 ZCCHC9Q8N567 271 aaKnown RBP10.39□□□□□ -0.75
HDAC6-222ENST00000478095 UBL4BQ8N7F7 174 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 HDAC11Q96DB2 347 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 LRIG1Q96JA1 1093 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 NSMCE3Q96MG7 304 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 OLFM3Q96PB7 478 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 MGME1Q9BQP7 344 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 OSBPL1AQ9BXW6 950 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 HDAC8Q9BY41 377 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 OSBPL8Q9BZF1 889 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 RBM22Q9NW64 420 aaKnown RBP eCLIP10.39□□□□□ -0.75
HDAC6-222ENST00000478095 SEPT10Q9P0V9 454 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 GGT7Q9UJ14 662 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 PILRBQ9UKJ0 227 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.39□□□□□ -0.75
HDAC6-222ENST00000478095 DOCK4Q8N1I0 1966 aa10.39□□□□□ -0.75
HDAC6-222ENST00000478095 MIF4GDA9UHW6 222 aaKnown RBP10.38□□□□□ -0.75
HDAC6-222ENST00000478095 PPP1R12AO14974 1030 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-222ENST00000478095 RNGTTO60942 597 aaKnown RBP10.38□□□□□ -0.75
HDAC6-222ENST00000478095 NEBLO76041 1014 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 PCDH8O95206 1070 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 JCHAINP01591 159 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 PRKCGP05129 697 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 HLA-DQB2P05538 268 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 CCNB1P14635 433 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 ITIH2P19823 946 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 TGM2P21980 687 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 CSNK1DP48730 415 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 RENBPP51606 427 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 AP1S1P61966 158 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 SEMG2Q02383 582 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 BCL2L1Q07817 233 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 PPIDQ08752 370 aaKnown RBP10.38□□□□□ -0.75
HDAC6-222ENST00000478095 ZBTB17Q13105 803 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 HNRNPDQ14103 355 aaKnown RBP10.38□□□□□ -0.75
HDAC6-222ENST00000478095 PDK1Q15118 436 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 CSRP2Q16527 193 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 TRIM61Q5EBN2 209 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 PLA2G2CQ5R387 149 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 CFAP58Q5T655 872 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 SEL1L3Q68CR1 1132 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 LAYNQ6UX15 382 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 BBS12Q6ZW61 710 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 TTC7BQ86TV6 843 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 ZC3H18Q86VM9 953 aaKnown RBP10.38□□□□□ -0.75
HDAC6-222ENST00000478095 ZSWIM9Q86XI8 627 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 TEX26Q8N6G2 289 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 PAF1Q8N7H5 531 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 MAML1Q92585 1016 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 P3H4Q92791 437 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 KLK6Q92876 244 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 HES6Q96HZ4 224 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 TSGA13Q96PP4 275 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 ALS2CR12Q96Q35 445 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 FAM118BQ9BPY3 351 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 CPEB1Q9BZB8 566 aaKnown RBP10.38□□□□□ -0.75
HDAC6-222ENST00000478095 PCED1AQ9H1Q7 454 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 SUV39H2Q9H5I1 410 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 ATP13A3Q9H7F0 1226 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 C10orf88Q9H8K7 445 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 EBF2Q9HAK2 575 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 NOD2Q9HC29 1040 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 VPS45Q9NRW7 570 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 RXFP3Q9NSD7 469 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 PCDHGC4Q9Y5F7 938 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 FADS3Q9Y5Q0 445 aa10.38□□□□□ -0.75
HDAC6-222ENST00000478095 A0A1W2PQU0 124 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 APOC4-APOC2K7ER74 178 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 NEMP1O14524 444 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 SPINT1O43278 529 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 GDF9O60383 454 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 APOC2P02655 101 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 ZNF806P0C7X5 589 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 TIMP2P16035 220 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 PRLRP16471 622 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 CR2P20023 1033 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 XPAP23025 273 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-222ENST00000478095 SERPINA4P29622 427 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 HSPA9P38646 679 aaKnown RBP10.37□□□□□ -0.75
HDAC6-222ENST00000478095 MAPK8P45983 427 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 COPS2P61201 443 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 DSC2Q02487 901 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 NSUN2Q08J23 767 aaKnown RBP eCLIP10.37□□□□□ -0.75
HDAC6-222ENST00000478095 CCDC15Q0P6D6 951 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 TRAF2Q12933 501 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms