RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 C4orf50Q6ZRC1 276 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 BNIPLQ7Z465 357 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 PIGZQ86VD9 579 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 OSTM1Q86WC4 334 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 DEFB106AQ8N104 65 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 NDUFAF2Q8N183 169 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 MPP5Q8N3R9 675 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 CCDC185Q8N715 623 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 MAB21L3Q8N8X9 362 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 COLGALT1Q8NBJ5 622 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 B3GALNT2Q8NCR0 500 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 STKLD1Q8NE28 680 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 SLC2A14Q8TDB8 520 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 CLEC4CQ8WTT0 213 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 RNF139Q8WU17 664 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 ATP2A3Q93084 1043 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 NTAN1Q96AB6 310 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 CCDC120Q96HB5 630 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 OXNAD1Q96HP4 312 aaPredicted RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 SLC2A13Q96QE2 648 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 SLC9A7Q96T83 725 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 NPY6RQ99463 290 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 PARK7Q99497 189 aaKnown RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 APOL6Q9BWW8 343 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 CADM1Q9BY67 442 aaKnown RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 DUSP16Q9BY84 665 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 BRD8Q9H0E9 1235 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 C12orf65Q9H3J6 166 aaKnown RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 NXF3Q9H4D5 531 aaKnown RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 CXorf56Q9H5V9 222 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 STN1Q9H668 368 aaKnown RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 DCLRE1BQ9H816 532 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 KCNK13Q9HB14 408 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 KCNK12Q9HB15 430 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 LRRC4Q9HBW1 653 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 ALG13Q9NP73 1137 aaKnown RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 CD320Q9NPF0 282 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 ARHGEF4Q9NR80 690 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 ARL8BQ9NVJ2 186 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 RRN3Q9NYV6 651 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 IGSF9Q9P2J2 1179 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 DCDC2Q9UHG0 476 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 ADAM28Q9UKQ2 775 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 SORCS3Q9UPU3 1222 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 PIN4Q9Y237 131 aaKnown RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 GINS2Q9Y248 185 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 COL4A4P53420 1690 aaPredicted RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 NLRC5Q86WI3 1866 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 SPTBN4Q9H254 2564 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 FASNP49327 2511 aaKnown RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 WDR27A2RRH5 827 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 ERI2A8K979 691 aaKnown RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 C9IYK1 514 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 SPECC1L-ADORA2AF8WAN1 911 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 HAS3O00219 553 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 RNF103O00237 685 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 EEF2KO00418 725 aaKnown RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 LIN7AO14910 233 aaPredicted RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 NCAM2O15394 837 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 PSMD3O43242 534 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 MTSS1O43312 755 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 UGT1A9O60656 530 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 MAGEC1O60732 1142 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 PAGE1O75459 146 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 TPBGLP0DKB5 382 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 GNAT1P11488 350 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 PTPN1P18031 435 aaKnown RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 GNAZP19086 355 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 IBSPP21815 317 aaPredicted RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 AKAP5P24588 427 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 LMO2P25791 158 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 MGAT1P26572 445 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 TKTP29401 623 aaKnown RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 GCKP35557 465 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 GP5P40197 560 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 HCAR3P49019 387 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 CPT1AP50416 773 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 CRYBB1P53674 252 aaPredicted RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 ATXN1P54253 815 aaKnown RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 GJA9P57773 515 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 LILRA4P59901 499 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 ADAM17P78536 824 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 SMAD3P84022 425 aaKnown RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 CAP1Q01518 475 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 DEUP1Q05D60 604 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 TMEM62Q0P6H9 643 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 ADIGQ0VDE8 80 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 AP1B1Q10567 949 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 SCAPQ12770 1279 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 IFRD2Q12894 506 aaPredicted RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 BMPR2Q13873 1038 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 DPYSQ14117 519 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 FRG1Q14331 258 aaKnown RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 SNX17Q15036 470 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 TAF11Q15544 211 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 CHI3L2Q15782 390 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 NKPD1Q17RQ9 610 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 DNAL1Q4LDG9 190 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 DCAF6Q58WW2 860 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms