RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 H3BRJ5 948 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 PCDH8O95206 1070 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 SPINK2P20155 84 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 CD38P28907 300 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 NEK3P51956 506 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 SNRPD1P62314 119 aaKnown RBP17.88■□□□□ 0.45
PTPN7-209ENST00000477554 SLC10A7Q0GE19 358 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 TMEM259Q4ZIN3 620 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 INO80DQ53TQ3 878 aaPredicted RBP17.88■□□□□ 0.45
PTPN7-209ENST00000477554 ZNF805Q5CZA5 627 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 PLPP6Q8IY26 295 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 PGBD5Q8N414 524 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 PCDH19Q8TAB3 1148 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 FAM71BQ8TC56 605 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 RAPGEF5Q92565 580 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 PREBQ9HCU5 417 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 DYRK4Q9NR20 520 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 TM7SF3Q9NS93 570 aa17.88■□□□□ 0.45
PTPN7-209ENST00000477554 AKAP13Q12802 2813 aa17.87■□□□□ 0.45
PTPN7-209ENST00000477554 CXorf51AA0A1B0GTR3 108 aa17.87■□□□□ 0.45
PTPN7-209ENST00000477554 ZSCAN5CA6NGD5 496 aaPredicted RBP17.87■□□□□ 0.45
PTPN7-209ENST00000477554 ARHGAP42A6NI28 874 aa17.87■□□□□ 0.45
PTPN7-209ENST00000477554 VILLO15195 856 aa17.87■□□□□ 0.45
PTPN7-209ENST00000477554 MFSD11O43934 449 aa17.87■□□□□ 0.45
PTPN7-209ENST00000477554 POP4O95707 220 aaKnown RBP17.87■□□□□ 0.45
PTPN7-209ENST00000477554 TIMP2P16035 220 aa17.87■□□□□ 0.45
PTPN7-209ENST00000477554 GEMIN4P57678 1058 aaKnown RBP17.87■□□□□ 0.45
PTPN7-209ENST00000477554 SFSWAPQ12872 951 aaKnown RBP17.87■□□□□ 0.45
PTPN7-209ENST00000477554 FBXL19Q6PCT2 694 aa17.87■□□□□ 0.45
PTPN7-209ENST00000477554 GDPD4Q6W3E5 623 aa17.87■□□□□ 0.45
PTPN7-209ENST00000477554 ADAT2Q7Z6V5 191 aaKnown RBP17.87■□□□□ 0.45
PTPN7-209ENST00000477554 HORMAD1Q86X24 394 aa17.87■□□□□ 0.45
PTPN7-209ENST00000477554 GATAD2AQ86YP4 633 aa17.87■□□□□ 0.45
PTPN7-209ENST00000477554 CAMK1DQ8IU85 385 aa17.87■□□□□ 0.45
PTPN7-209ENST00000477554 TMEM145Q8NBT3 493 aa17.87■□□□□ 0.45
PTPN7-209ENST00000477554 GDAP1L1Q96MZ0 367 aa17.87■□□□□ 0.45
PTPN7-209ENST00000477554 KDM4CQ9H3R0 1056 aa17.87■□□□□ 0.45
PTPN7-209ENST00000477554 IPO11Q9UI26 975 aaKnown RBP17.87■□□□□ 0.45
PTPN7-209ENST00000477554 SALL4Q9UJQ4 1053 aa17.87■□□□□ 0.45
PTPN7-209ENST00000477554 IGLON5A6NGN9 336 aa17.86■□□□□ 0.45
PTPN7-209ENST00000477554 KIF5CO60282 957 aa17.86■□□□□ 0.45
PTPN7-209ENST00000477554 CBFA2T3O75081 653 aa17.86■□□□□ 0.45
PTPN7-209ENST00000477554 IGSF6O95976 241 aa17.86■□□□□ 0.45
PTPN7-209ENST00000477554 CSRP1P21291 193 aaKnown RBP17.86■□□□□ 0.45
PTPN7-209ENST00000477554 ARL4AP40617 200 aa17.86■□□□□ 0.45
PTPN7-209ENST00000477554 KRT81Q14533 505 aa17.86■□□□□ 0.45
PTPN7-209ENST00000477554 ZNF423Q2M1K9 1284 aa17.86■□□□□ 0.45
PTPN7-209ENST00000477554 TPRG1LQ5T0D9 272 aa17.86■□□□□ 0.45
PTPN7-209ENST00000477554 NCBP2-AS2Q69YL0 99 aa17.86■□□□□ 0.45
PTPN7-209ENST00000477554 NAPEPLDQ6IQ20 393 aa17.86■□□□□ 0.45
PTPN7-209ENST00000477554 GCNT7Q6ZNI0 430 aa17.86■□□□□ 0.45
PTPN7-209ENST00000477554 PRPF39Q86UA1 669 aaKnown RBP17.86■□□□□ 0.45
PTPN7-209ENST00000477554 NAXDQ8IW45 347 aa17.86■□□□□ 0.45
PTPN7-209ENST00000477554 C17orf53Q8N3J3 647 aaPredicted RBP17.86■□□□□ 0.45
PTPN7-209ENST00000477554 PQLC3Q8N755 202 aa17.86■□□□□ 0.45
PTPN7-209ENST00000477554 TRIM58Q8NG06 486 aa17.86■□□□□ 0.45
PTPN7-209ENST00000477554 ALS2CR12Q96Q35 445 aa17.86■□□□□ 0.45
PTPN7-209ENST00000477554 SP110Q9HB58 689 aa17.86■□□□□ 0.45
PTPN7-209ENST00000477554 ESPNB1AK53 854 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 AREL1O15033 823 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 MAFKO60675 156 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 PALMO75781 387 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 PAK4O96013 591 aaPredicted RBP17.85■□□□□ 0.45
PTPN7-209ENST00000477554 NXPH1P58417 271 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 SLC10A2Q12908 348 aaPredicted RBP17.85■□□□□ 0.45
PTPN7-209ENST00000477554 BNIP3Q12983 259 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 IHHQ14623 411 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 PTPRRQ15256 657 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 TEAD4Q15561 434 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 TMCO3Q6UWJ1 677 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 NYAP1Q6ZVC0 841 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 SYCE1Q8N0S2 351 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 SLC22A18ASQ8N1D0 253 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 TPCN2Q8NHX9 752 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 PPP1R16AQ96I34 528 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 ZDHHC5Q9C0B5 715 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 COQ6Q9Y2Z9 468 aa17.85■□□□□ 0.45
PTPN7-209ENST00000477554 POM121BA6NF01 834 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 C3orf70A6NLC5 250 aaPredicted RBP17.84■□□□□ 0.45
PTPN7-209ENST00000477554 UPK3BL1B0FP48 263 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 UPK3BL2E5RIL1 263 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 TLR4O00206 839 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 CER1O95813 267 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 CEACAM1P13688 526 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 C21orf59P57076 290 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 MAXP61244 160 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 IL10RBQ08334 325 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 ANKRD20A8PQ5CZ79 823 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 OR13H1Q8NG92 308 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 UBE2Q2Q8WVN8 375 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 CASKIN2Q8WXE0 1202 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 BMFQ96LC9 184 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 KLF6Q99612 283 aaPredicted RBP17.84■□□□□ 0.45
PTPN7-209ENST00000477554 WRAP53Q9BUR4 548 aaKnown RBP17.84■□□□□ 0.45
PTPN7-209ENST00000477554 CALN1Q9BXU9 219 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 PCOLCE2Q9UKZ9 415 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 WASF3Q9UPY6 502 aa17.84■□□□□ 0.45
PTPN7-209ENST00000477554 MMP20O60882 483 aa17.83■□□□□ 0.45
PTPN7-209ENST00000477554 TNNT1P13805 278 aa17.83■□□□□ 0.45
PTPN7-209ENST00000477554 PMLP29590 882 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms