RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PNMA8BQ9ULN7 279 aaPredicted RBP11.12□□□□□ -0.63
COL27A1-204ENST00000477421 RGSL1A5PLK6 1076 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 CCNT2O60583 730 aaKnown RBP11.12□□□□□ -0.63
COL27A1-204ENST00000477421 PROZP22891 400 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 GJA5P36382 358 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 RALGDSQ12967 914 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 ZBTB17Q13105 803 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 LAMB3Q13751 1172 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 GK5Q6ZS86 529 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 GPRIN1Q7Z2K8 1008 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 CATSPER1Q8NEC5 780 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 OR7D4Q8NG98 312 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 TMEM209Q96SK2 561 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 NFKBIZQ9BYH8 718 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 EGFL7Q9UHF1 273 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 CROTQ9UKG9 612 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 PCDHB9Q9Y5E1 797 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 COL2A1P02458 1487 aaPredicted RBP11.12□□□□□ -0.63
COL27A1-204ENST00000477421 PARNO95453 639 aaKnown RBP11.12□□□□□ -0.63
COL27A1-204ENST00000477421 WARSP23381 471 aaKnown RBP11.12□□□□□ -0.63
COL27A1-204ENST00000477421 TRNP1Q6NT89 227 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 CNSTQ6PJW8 725 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 POTEHQ6S545 545 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 PIWIL4Q7Z3Z4 852 aaKnown RBP11.12□□□□□ -0.63
COL27A1-204ENST00000477421 PLD6Q8N2A8 252 aaKnown RBP11.12□□□□□ -0.63
COL27A1-204ENST00000477421 ARRDC4Q8NCT1 418 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 JADE3Q92613 823 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 YY1AP1Q9H869 796 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 CNTN3Q9P232 1028 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 MCM8Q9UJA3 840 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 PCDHGC4Q9Y5F7 938 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 MYO1GB0I1T2 1018 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 TMEM233B4DJY2 109 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 DPYSL4O14531 572 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 TGDSO95455 350 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 ESRRBO95718 433 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 CLPTM1O96005 669 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 LRPAP1P30533 357 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 CDK18Q07002 472 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 CRHR2Q13324 411 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 TBCELQ5QJ74 424 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 MILR1Q7Z6M3 343 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 SLC22A9Q8IVM8 553 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 CASP10Q92851 521 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 POM121Q96HA1 1249 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 C1orf50Q9BV19 199 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 ADGRE3Q9BY15 652 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 CATSPERZQ9NTU4 200 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 RIC8BQ9NVN3 520 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 PKD2L2Q9NZM6 624 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 VTI1BQ9UEU0 232 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 SEPT3Q9UH03 358 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 ADAM28Q9UKQ2 775 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 ATP11BQ9Y2G3 1177 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 KIAA1551Q9HCM1 1747 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 CAPN8A6NHC0 703 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 SYNCRIPO60506 623 aaKnown RBP11.11□□□□□ -0.63
COL27A1-204ENST00000477421 RFPL1O75677 317 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 TM7SF2O76062 418 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 LINC00032P0C843 101 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 PSMC3P17980 439 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 ATP6V1C1P21283 382 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 PAX3P23760 479 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 CYP2C18P33260 490 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 GPR15P49685 360 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 IDH3AP50213 366 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 PRKCZQ05513 592 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 POM121L1PQ3SYA9 428 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 CACUL1Q86Y37 369 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.11□□□□□ -0.63
COL27A1-204ENST00000477421 CDYL2Q8N8U2 506 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 PPP2R3CQ969Q6 453 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 HMCESQ96FZ2 354 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 FAR2Q96K12 515 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 NPY6RQ99463 290 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 ACBD6Q9BR61 282 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 SSU72Q9NP77 194 aaKnown RBP11.11□□□□□ -0.63
COL27A1-204ENST00000477421 SLC7A8Q9UHI5 535 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 PGAP2Q9UHJ9 254 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 TIMM22Q9Y584 194 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 FAM159BA6NKW6 160 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 SYCE1LA8MT33 242 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 FFAR3O14843 346 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 GPR42O15529 346 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 CLASP2O75122 1294 aaKnown RBP11.11□□□□□ -0.63
COL27A1-204ENST00000477421 FKBP9O95302 570 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 MYL4P12829 197 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 GRIA3P42263 894 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 BFSP2Q13515 415 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 SLC9B1Q4ZJI4 515 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 PLEKHG4Q58EX7 1191 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 FKBP9P1Q75LS8 142 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 DHDDSQ86SQ9 333 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 PHTF2Q8N3S3 785 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 DENND1AQ8TEH3 1009 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 RSPH1Q8WYR4 309 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 MRPS31Q92665 395 aaKnown RBP11.11□□□□□ -0.63
COL27A1-204ENST00000477421 ANKRD6Q9Y2G4 727 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 NDUFAF1Q9Y375 327 aa11.11□□□□□ -0.63
COL27A1-204ENST00000477421 COL22A1Q8NFW1 1626 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms