RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 TM9SF3Q9HD45 589 aa11.78□□□□□ -0.52
LSM2-212ENST00000477182 ETNK2Q9NVF9 386 aa11.78□□□□□ -0.52
LSM2-212ENST00000477182 PLK2Q9NYY3 685 aa11.78□□□□□ -0.52
LSM2-212ENST00000477182 SMARCAL1Q9NZC9 954 aa11.78□□□□□ -0.52
LSM2-212ENST00000477182 PPARGC1AQ9UBK2 798 aaKnown RBP11.78□□□□□ -0.52
LSM2-212ENST00000477182 STON1Q9Y6Q2 735 aa11.78□□□□□ -0.52
LSM2-212ENST00000477182 DOPEY2Q9Y3R5 2298 aa11.77□□□□□ -0.52
LSM2-212ENST00000477182 TCRBV7S2A1N4TA0A589 114 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 TYW5A2RUC4 315 aaKnown RBP11.77□□□□□ -0.53
LSM2-212ENST00000477182 WASH3PC4AMC7 463 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 NEDD8-MDP1E9PL57 170 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 CES2O00748 559 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 APOL1O14791 398 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 FGF10O15520 208 aaPredicted RBP11.77□□□□□ -0.53
LSM2-212ENST00000477182 SYNCRIPO60506 623 aaKnown RBP11.77□□□□□ -0.53
LSM2-212ENST00000477182 CST8O60676 142 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 CYBBP04839 570 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 RHOQP17081 205 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 DGKGP49619 791 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 ACADVLP49748 655 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 CLDN6P56747 220 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 DYNLT1P63172 113 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 ADCY2Q08462 1091 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 TFDP2Q14188 446 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 MPPE1Q53F39 396 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 TTC39BQ5VTQ0 682 aaPredicted RBP11.77□□□□□ -0.53
LSM2-212ENST00000477182 FYB2Q5VWT5 728 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 ADAT2Q7Z6V5 191 aaKnown RBP11.77□□□□□ -0.53
LSM2-212ENST00000477182 NLRP14Q86W24 1093 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 SLC13A5Q86YT5 568 aaPredicted RBP11.77□□□□□ -0.53
LSM2-212ENST00000477182 RTL3Q8N8U3 475 aaKnown RBP11.77□□□□□ -0.53
LSM2-212ENST00000477182 CAPZA3Q96KX2 299 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 ZNF578Q96N58 590 aaPredicted RBP11.77□□□□□ -0.53
LSM2-212ENST00000477182 BBS2Q9BXC9 721 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 FAM117AQ9C073 453 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 CPNE5Q9HCH3 593 aa11.77□□□□□ -0.53
LSM2-212ENST00000477182 A0A1B0GTQ1 180 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 A0A1B0GVM2 712 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 TCAF2A6NFQ2 919 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 WASH4PA8MWX3 477 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 TJP3O95049 919 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 PENKP01210 267 aaPredicted RBP11.76□□□□□ -0.53
LSM2-212ENST00000477182 FGGP02679 453 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 TYRP14679 529 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 GLDCP23378 1020 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 HOXD9P28356 352 aaPredicted RBP11.76□□□□□ -0.53
LSM2-212ENST00000477182 CTSKP43235 329 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 CDH4P55283 916 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 IL9RQ01113 521 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 VAC14Q08AM6 782 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 DNAJC3Q13217 504 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 DNTTIP2Q5QJE6 756 aaKnown RBP11.76□□□□□ -0.53
LSM2-212ENST00000477182 CCDC181Q5TID7 509 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 NCBP2-AS2Q69YL0 99 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 SLC9A4Q6AI14 798 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 TMCO3Q6UWJ1 677 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 NPNTQ6UXI9 565 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 BBS12Q6ZW61 710 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 CHST9Q7L1S5 443 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 LSMEM2Q8N112 164 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 RASGEF1CQ8N431 466 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 CARNMT1Q8N4J0 409 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 PLD5Q8N7P1 536 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 NETO2Q8NC67 525 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 UCMAQ8WVF2 138 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 SKA1Q96BD8 255 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 HAUS1Q96CS2 278 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 DPH1Q9BZG8 443 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 NDFIP2Q9NV92 336 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 TMEM248Q9NWD8 314 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 MARK1Q9P0L2 795 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 ZNF212Q9UDV6 495 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 CLCA2Q9UQC9 943 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 EFR3BQ9Y2G0 817 aa11.76□□□□□ -0.53
LSM2-212ENST00000477182 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.76□□□□□ -0.53
LSM2-212ENST00000477182 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.75□□□□□ -0.53
LSM2-212ENST00000477182 PGRMC1O00264 195 aaKnown RBP11.75□□□□□ -0.53
LSM2-212ENST00000477182 YKT6O15498 198 aa11.75□□□□□ -0.53
LSM2-212ENST00000477182 MFSD11O43934 449 aa11.75□□□□□ -0.53
LSM2-212ENST00000477182 CLDN11O75508 207 aa11.75□□□□□ -0.53
LSM2-212ENST00000477182 LUC7L3O95232 432 aaKnown RBP11.75□□□□□ -0.53
LSM2-212ENST00000477182 ITGAVP06756 1048 aa11.75□□□□□ -0.53
LSM2-212ENST00000477182 ZFXP17010 805 aaPredicted RBP11.75□□□□□ -0.53
LSM2-212ENST00000477182 OR1E1P30953 314 aa11.75□□□□□ -0.53
LSM2-212ENST00000477182 C21orf59P57076 290 aa11.75□□□□□ -0.53
LSM2-212ENST00000477182 ZNF177Q13360 481 aaPredicted RBP11.75□□□□□ -0.53
LSM2-212ENST00000477182 PAFAH1B3Q15102 231 aaKnown RBP11.75□□□□□ -0.53
LSM2-212ENST00000477182 LONRF2Q1L5Z9 754 aa11.75□□□□□ -0.53
LSM2-212ENST00000477182 MPP7Q5T2T1 576 aa11.75□□□□□ -0.53
LSM2-212ENST00000477182 ZNF574Q6ZN55 896 aaPredicted RBP11.75□□□□□ -0.53
LSM2-212ENST00000477182 CREG2Q8IUH2 290 aa11.75□□□□□ -0.53
LSM2-212ENST00000477182 MFN1Q8IWA4 741 aa11.75□□□□□ -0.53
LSM2-212ENST00000477182 TP53INP2Q8IXH6 220 aa11.75□□□□□ -0.53
LSM2-212ENST00000477182 NPWQ8N729 165 aa11.75□□□□□ -0.53
LSM2-212ENST00000477182 WFDC5Q8TCV5 224 aa11.75□□□□□ -0.53
LSM2-212ENST00000477182 ACTRT1Q8TDG2 376 aa11.75□□□□□ -0.53
LSM2-212ENST00000477182 NAF1Q96HR8 494 aaKnown RBP11.75□□□□□ -0.53
LSM2-212ENST00000477182 CELF6Q96J87 481 aaKnown RBP11.75□□□□□ -0.53
LSM2-212ENST00000477182 KLC2Q9H0B6 622 aa11.75□□□□□ -0.53
LSM2-212ENST00000477182 SAE1Q9UBE0 346 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms